RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PGM2Q96G03 612 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 VSTM2LQ96N03 204 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 SFXN2Q96NB2 322 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 COL21A1Q96P44 957 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 MED18Q9BUE0 208 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 MRPL1Q9BYD6 325 aaKnown RBP6.58□□□□□ -1.36
YBX3-209ENST00000540747 IPPKQ9H8X2 491 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 SAYSD1Q9NPB0 183 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 KLRF1Q9NZS2 232 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 ZNF175Q9Y473 711 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 HEATR5AQ86XA9 2040 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 CADP27708 2225 aa6.58□□□□□ -1.36
YBX3-209ENST00000540747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.58□□□□□ -1.362e-6■■□□□ 14.1
YBX3-209ENST00000540747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 C1orf226A1L170 272 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SYCE1LA8MT33 242 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 H0YC42 278 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 OVOL3O00110 214 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ABCB7O75027 752 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TNFRSF21O75509 655 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SMNDC1O75940 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
YBX3-209ENST00000540747 SIX3O95343 332 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 KLK1P06870 262 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GSTA2P09210 222 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 NID1P14543 1247 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 POU2F1P14859 743 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 PCSK2P16519 638 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 CSNK2A2P19784 350 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 GRK2P25098 689 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 DPP4P27487 766 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SPRP35270 261 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 FEN1P39748 380 aaKnown RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 PIK3CGP48736 1102 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SUCLG1P53597 346 aaKnown RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 TPD52P55327 224 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 CORO7P57737 925 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 MRPS25P82663 173 aaKnown RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 IRF9Q00978 393 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TNK1Q13470 666 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GTF2H2Q13888 395 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 FGFBP1Q14512 234 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 LTB4RQ15722 352 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 PFKFB4Q16877 469 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TMEM44Q2T9K0 475 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GGTA1PQ4G0N0 100 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZNF628Q5EBL2 1059 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 BEX5Q5H9J7 111 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 C10orf62Q5T681 223 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 GRTP1Q5TC63 336 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 FRG2Q64ET8 278 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GTF2H2CQ6P1K8 395 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZNF704Q6ZNC4 412 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 PLEKHM3Q6ZWE6 761 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 COMMD6Q7Z4G1 85 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 MYLK4Q86YV6 388 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 METTL25Q8N6Q8 603 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZNF611Q8N823 705 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 CNEP1R1Q8N9A8 125 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 EIF1ADQ8N9N8 165 aaKnown RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ADCY4Q8NFM4 1077 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 OR2M3Q8NG83 312 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 OR52B6Q8NGF0 335 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 OR52R1Q8NGF1 315 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 FNDC9Q8TBE3 224 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 PYROXD1Q8WU10 500 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 CDKL2Q92772 493 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TM4SF18Q96CE8 201 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ERP27Q96DN0 273 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZNF845Q96IR2 970 aaPredicted RBP6.57□□□□□ -1.36
YBX3-209ENST00000540747 FAM111AQ96PZ2 611 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 FRG2BQ96QU4 278 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SLC39A3Q9BRY0 314 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 NTMT1Q9BV86 223 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TRIM31Q9BZY9 425 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 TSPYL1Q9H0U9 437 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 ZBTB26Q9HCK0 441 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GRHL1Q9NZI5 618 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 NFU1Q9UMS0 254 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SNX24Q9Y343 169 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 CR1P17927 2039 aa6.57□□□□□ -1.36
YBX3-209ENST00000540747 GOLGA6L10A6NI86 522 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 HS3ST1O14792 307 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 FADS1O60427 444 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 NME6O75414 186 aaPredicted RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 AQP8O94778 261 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 CLDN9O95484 217 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PLAUP00749 431 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 C2P06681 752 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PEPDP12955 493 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PPP3CBP16298 524 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 TBXA2RP21731 343 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 MAPK12P53778 367 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 DSCR4P56555 118 aaPredicted RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 CLDN20P56880 219 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 SIRPAP78324 504 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PSPHP78330 225 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 MRPS35P82673 323 aaKnown RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 NAB1Q13506 487 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms