RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CLEC3AO75596 197 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TIMP1P01033 207 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 C1QBP02746 253 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 HMGN2P05204 90 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 ADRB3P13945 408 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 OMPP47874 163 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MLLT1Q03111 559 aaPredicted RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 LASP1Q14847 261 aaKnown RBP11.54□□□□□ -0.56
NPC1-202ENST00000540608 TMEM44Q2T9K0 475 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TMEM52BQ4KMG9 183 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CLEC12AQ5QGZ9 265 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 ZNF697Q5TEC3 545 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 METRNLQ641Q3 311 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SYCE2Q6PIF2 218 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 ABI3BPQ7Z7G0 1075 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 MARCH9Q86YJ5 346 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 GJD3Q8N144 294 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 OR4F15Q8NGB8 312 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 COX14Q96I36 57 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 ARHGDIGQ99819 225 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 TBC1D17Q9HA65 648 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 ASB6Q9NWX5 421 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CNIH4Q9P003 139 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 NLKQ9UBE8 527 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 CLCA3PQ9Y6N3 262 aa11.54□□□□□ -0.56
NPC1-202ENST00000540608 SURF4O15260 269 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 PPM1DO15297 605 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 AKAP8O43823 692 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 ZNF780AO75290 641 aaPredicted RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 SLC43A1O75387 559 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 NCR1O76036 304 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ACP5P13686 325 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 CELP19835 753 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 SSR2P43308 183 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 WSCD2Q2TBF2 565 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ZNF311Q5JNZ3 666 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 C9orf64Q5T6V5 341 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ZNF793Q6ZN11 406 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 GRASPQ7Z6J2 395 aaPredicted RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 KLHL36Q8N4N3 616 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 DNAJA4Q8WW22 397 aaPredicted RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 OSTF1Q92882 214 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 NXPE3Q969Y0 559 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 FAM46AQ96IP4 442 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 C17orf62Q9BQA9 187 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 AICDAQ9GZX7 198 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 BTBD1Q9H0C5 482 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 QRSL1Q9H0R6 528 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 SEMA4GQ9NTN9 838 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ING3Q9NXR8 418 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ADAM30Q9UKF2 790 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 POLHQ9Y253 713 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 IRAK3Q9Y616 596 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 CKAP5Q14008 2032 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 SLC9A3R1O14745 358 aaPredicted RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 CPNE3O75131 537 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 SERPIND1P05546 499 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 STAT5AP42229 794 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 AVPR1BP47901 424 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ABATP80404 500 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 CCDC58Q4VC31 144 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ERN2Q76MJ5 926 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 TRILQ7L0X0 811 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 OR52N1Q8NH53 320 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 PIGXQ8TBF5 258 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 OR8D1Q8WZ84 308 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 DIO2Q92813 273 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 UPRTQ96BW1 309 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 ANKRD19PQ9H560 264 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 TRIM45Q9H8W5 580 aaPredicted RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 KCNE3Q9Y6H6 103 aa11.53□□□□□ -0.56
NPC1-202ENST00000540608 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
NPC1-202ENST00000540608 GLOD5A6NK44 160 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 PRRT4C9JH25 899 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 ORC5O43913 435 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 SLC19A2O60779 497 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 PRKRAO75569 313 aaKnown RBP11.52□□□□□ -0.56
NPC1-202ENST00000540608 IGHA1P01876 353 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 CHRNB1P11230 501 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 EPCAMP16422 314 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 CEBPBP17676 345 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 GALP22466 123 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 SLC9A5Q14940 896 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 TMEM35AQ53FP2 167 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 C11orf74Q86VG3 221 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 LRRTM4Q86VH4 590 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 OR56A1Q8NGH5 318 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 SPRYD4Q8WW59 207 aaPredicted RBP11.52□□□□□ -0.56
NPC1-202ENST00000540608 MOAP1Q96BY2 351 aa11.52□□□□□ -0.56
NPC1-202ENST00000540608 RNF32Q9H0A6 362 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms