RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TSPAN10Q9H1Z9 355 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-214ENST00000540539 PIGMQ9H3S5 423 aa8.93□□□□□ -0.98
CLIP1-214ENST00000540539 ACSS1Q9NUB1 689 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-214ENST00000540539 UBP1Q9NZI7 540 aa8.93□□□□□ -0.98
CLIP1-214ENST00000540539 CNOT2Q9NZN8 540 aaKnown RBP8.93□□□□□ -0.98
CLIP1-214ENST00000540539 YARS2Q9Y2Z4 477 aaKnown RBP8.93□□□□□ -0.98
CLIP1-214ENST00000540539 WDR81Q562E7 1941 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 LOC285095A0A1B0GVY8 99 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 LRRC14BA6NHZ5 514 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 MBTPS2O43462 519 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 AQP8O94778 261 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF682O95780 498 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ABOP16442 354 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 RCC1P18754 421 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 GPD1P21695 349 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PTPN3P26045 913 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PXNP49023 591 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 LSM6P62312 80 aaKnown RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 VLDLRP98155 873 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 GAMTQ14353 236 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 MPPED2Q15777 294 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 LY6KQ17RY6 165 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ARHGAP40Q5TG30 622 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TAPT1Q6NXT6 567 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TMIGD1Q6UXZ0 262 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 MOB3CQ70IA8 216 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 C1orf52Q8N6N3 182 aaKnown RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 RAB3CQ96E17 227 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 NSUN5Q96P11 429 aaKnown RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ATF6BQ99941 703 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ADPGKQ9BRR6 497 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 CACNG6Q9BXT2 260 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 SLC38A1Q9H2H9 487 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 SMOC1Q9H4F8 434 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 CA10Q9NS85 328 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 RASL12Q9NYN1 266 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ASB1Q9Y576 335 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 AGAP14A8MT82 685 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ACKR2O00590 384 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 OR2T1O43869 369 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 CACNG3O60359 315 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 IGHA2P01877 340 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 USP17L7P0C7H9 530 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TXNP10599 105 aaKnown RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ODC1P11926 461 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF35P13682 527 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PAX1P15863 534 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 GAB1Q13480 694 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TTLL4Q14679 1199 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 LYPD4Q6UWN0 246 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 B3GNT9Q6UX72 402 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ALKAL1Q6UXT8 129 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PHACTR4Q8IZ21 702 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 C10orf111Q8N326 155 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 Q8NFD4 153 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 HIST1H2BAQ96A08 127 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 C14orf79Q96F83 325 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 MED8Q96G25 268 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 P2RY11Q96G91 374 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PARD6GQ9BYG4 376 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 POLR2J2Q9GZM3 115 aaKnown RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 JPH1Q9HDC5 661 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ENAMQ9NRM1 1142 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 TEX10Q9NXF1 929 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF629Q9UEG4 869 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-214ENST00000540539 PRKAB1Q9Y478 270 aa8.92□□□□□ -0.98
CLIP1-214ENST00000540539 A0A087WZ62 844 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 TMEM72A0PK05 275 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 C2CD4BA6NLJ0 364 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 NPIPB9F8W1W9 429 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 BCAT2O15382 392 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 EEF1E1O43324 174 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 KLHL18O94889 574 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 RHOP08100 348 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 NPSP0C0P6 89 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 IQCF3P0C7M6 154 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 CLUP10909 449 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 PEPDP12955 493 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 CD19P15391 556 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 NME1P15531 152 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 HOXB6P17509 224 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 AHCYP23526 432 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 ADCYAP1R1P41586 468 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 RAG2P55895 527 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 FAM189BP81408 668 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 SP4Q02446 784 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 TSNQ15631 228 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 FNDC3BQ53EP0 1204 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
CLIP1-214ENST00000540539 MSRB3Q8IXL7 192 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF567Q8N184 647 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 HDDC3Q8N4P3 179 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF614Q8N883 585 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 MCPH1Q8NEM0 835 aa8.91□□□□□ -0.98
CLIP1-214ENST00000540539 IFI44Q8TCB0 444 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms