RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CLCNKAP51800 687 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TBX4P57082 545 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FXYD6P3P58550 94 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 COTL1Q14019 142 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ZNF124Q15973 351 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FAM71E2Q8N5Q1 922 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 CLDN19Q8N6F1 224 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 GEMIN6Q8WXD5 167 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TUBG2Q9NRH3 451 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 AGO1Q9UL18 857 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 F9P00740 461 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 C1QCP02747 245 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MMP2P08253 660 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 GPR4P46093 362 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 SSTP61278 116 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 RAET1GQ6H3X3 334 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FAM109BQ6ICB4 259 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 GPAT4Q86UL3 456 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 OR7G2Q8NG99 324 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ATOH1Q92858 354 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 FUBP1Q96AE4 644 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 FAM46AQ96IP4 442 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 LRIG1Q96JA1 1093 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 JSRP1Q96MG2 331 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 MFSD1Q9H3U5 465 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ST6GALNAC4Q9H4F1 302 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MINDY3Q9H8M7 445 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MED20Q9H944 212 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ASB1Q9Y576 335 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 PCDHGB7Q9Y5F8 929 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FXYD1O00168 92 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MAS1P04201 325 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 GABRR2P28476 465 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TTPAP49638 278 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TTLL9Q3SXZ7 439 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 OR5T1Q8NG75 326 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 KIAA1191Q96A73 305 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 EPYCQ99645 322 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ATF6BQ99941 703 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FAM83CQ9BQN1 747 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 PAPOLGQ9BWT3 736 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 CNIH4Q9P003 139 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 SLC22A14Q9Y267 594 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 A0A1B0GUL6 1792 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 BCORQ6W2J9 1755 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MYO18AQ92614 2054 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 PRKYO43930 277 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 AOC2O75106 756 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 SC5DO75845 299 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MNDAP41218 407 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 RPIAP49247 311 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 C1orf52Q8N6N3 182 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 IL17RCQ8NAC3 791 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 OR52I1Q8NGK6 324 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MRPL48Q96GC5 212 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FAM183AA6NL82 134 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 UPK1AO00322 258 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 ST8SIA5O15466 376 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 FBXO24O75426 580 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 PPP2R1BP30154 601 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ARL2P36404 184 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 RHOAP61586 193 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 CDK6Q00534 326 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 MFSD13AQ14CX5 517 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 HHIPL2Q6UWX4 724 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 SEZ6L2Q6UXD5 910 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 STEAP2Q8NFT2 490 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 OR14A16Q8NHC5 309 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 SCAMP5Q8TAC9 235 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 INTS12Q96CB8 462 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 NDRG4Q9ULP0 352 aaKnown RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 STK16O75716 305 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 RECQL4O94761 1208 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 CXCL14O95715 111 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 SCGB1D1O95968 90 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 TGFB1P01137 390 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 IFNA10P01566 189 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 IL1AP01583 271 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 IFNA4P05014 189 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 SAGP10523 405 aaPredicted RBP10.49□□□□□ -0.73
PBX1-212ENST00000540236 AHCYP23526 432 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 EDNRBP24530 442 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 EEF1A1P68104 462 aaKnown RBP10.49□□□□□ -0.73
PBX1-212ENST00000540236 FABP5Q01469 135 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 MEF2AQ02078 507 aaPredicted RBP10.49□□□□□ -0.73
PBX1-212ENST00000540236 EEF1A2Q05639 463 aaKnown RBP10.49□□□□□ -0.73
PBX1-212ENST00000540236 KIAA0141Q14154 515 aaPredicted RBP10.49□□□□□ -0.73
PBX1-212ENST00000540236 ANXA8L1Q5VT79 327 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 EEF1A1P5Q5VTE0 462 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 ZNF687Q8N1G0 1237 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 OR10D4PQ8NGN7 298 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
PBX1-212ENST00000540236 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms