RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ZFAND5O76080 213 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ITGAMP11215 1152 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DRD5P21918 477 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ME2P23368 584 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SYPL1Q16563 259 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CRTC2Q53ET0 693 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 HEPHL1Q6MZM0 1159 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 C16orf47Q6ZP98 133 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MICU2Q8IYU8 434 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 COX18Q8N8Q8 333 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SLC38A5Q8WUX1 472 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 THAP4Q8WY91 577 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CCDC124Q96CT7 223 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 LCORQ96JN0 433 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SPATA9Q9BWV2 254 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 Q9N2J8 555 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 A4GALTQ9NPC4 353 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SLC7A8Q9UHI5 535 aa17.5■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ELOVL7A1L3X0 281 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FRG2CA6NGY1 282 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 AGR2O95994 175 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SERPINA7P05543 415 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BCHEP06276 602 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 HTR1EP28566 365 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NR0B1P51843 470 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DCAF7P61962 342 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CDK6Q00534 326 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 RBBP4Q09028 425 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CDC20Q12834 499 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ATAD3BQ5T9A4 648 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ERICH5Q6P6B1 374 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 OLIG3Q7RTU3 272 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ANKFN1Q8N957 763 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 C11orf65Q8NCR3 313 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 C17orf47Q8NEP4 570 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 OR5L2Q8NGL0 311 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NFKBIDQ8NI38 313 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SNRNP27Q8WVK2 155 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FER1L6-AS2Q96M78 137 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 LMF1Q96S06 567 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PCDHAC1Q9H158 963 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 EXD2Q9NVH0 621 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 P2RX2Q9UBL9 471 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 EGFL7Q9UHF1 273 aa17.49■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SOX30O94993 753 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TRHRP34981 398 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 POU6F2P78424 691 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MS4A2Q01362 244 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SCARB2Q14108 478 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FXNQ16595 210 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZNF630Q2M218 657 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 DCST2Q5T1A1 773 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CCNJQ5T5M9 372 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TCTN3Q6NUS6 607 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 KBTBD2Q8IY47 623 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CHDHQ8NE62 594 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TP53INP1Q96A56 240 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 RMND5BQ96G75 393 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TMEM19Q96HH6 336 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BTBD2Q9BX70 525 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SUCOQ9UBS9 1254 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PCDHGB3Q9Y5G1 929 aa17.48■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ARGFXA6NJG6 315 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 WWP2O00308 870 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SLC28A2O43868 658 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 KCNK2O95069 426 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NR2F1P10589 423 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NQO1P15559 274 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 NCK1P16333 377 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PCGF2P35227 344 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PIGAP37287 484 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MRPS22P82650 360 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TRIM25Q14258 630 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ARHGAP11BQ3KRB8 267 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FIGNL1Q6PIW4 674 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CCDC81Q6ZN84 652 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 C16orf62Q7Z3J2 963 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GALNT10Q86SR1 603 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 PTRH1Q86Y79 214 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 UBL7Q96S82 380 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 SDF2Q99470 211 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 RUBCNLQ9H714 662 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ATP13A2Q9NQ11 1180 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 FBXO34Q9NWN3 711 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 MYOTQ9UBF9 498 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CBLCQ9ULV8 474 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 LIPT1Q9Y234 373 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 A8MUI8 341 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 K7ENP7 123 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 TO15178 435 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZNF354AO60765 605 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 ZIC2O95409 532 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 H6PDO95479 791 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 IGKV1D-16P01601 117 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CHRM4P08173 479 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 GGT1P19440 569 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 BNIP2Q12982 314 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 CHAF1BQ13112 559 aa17.47■□□□□ 0.39
TNFRSF1A-213ENST00000540022 AIMP2Q13155 320 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms