RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PNLIPRP2P54317 469 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 WNT3P56703 355 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PHC1P78364 1004 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 CYP27C1Q4G0S4 372 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC9B1Q4ZJI4 515 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 EMC4Q5J8M3 183 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 EXOSC6Q5RKV6 272 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 ARHGAP11AQ6P4F7 1023 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 NCCRP1Q6ZVX7 275 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 SZRD1Q7Z422 152 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PACS2Q86VP3 889 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PSMA8Q8TAA3 256 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 FBXO30Q8TB52 745 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 FAM57AQ8TBR7 257 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 RNF138Q8WVD3 245 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PIK3R3Q92569 461 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 TMEM41AQ96HV5 264 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 TEX37Q96LM6 180 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 OSBPL11Q9BXB4 747 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 SLCO1B3Q9NPD5 702 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 CBLCQ9ULV8 474 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 MYO7BQ6PIF6 2116 aa16.73■□□□□ 0.27
SNRPA1-203ENST00000540017 HECTD1Q9ULT8 2610 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 PTPN13Q12923 2485 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 USP9YO00507 2555 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 TRPC5OSA6NMA1 111 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 C17orf51A8MQB3 221 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SLCO1B7G3V0H7 640 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 ADAM10O14672 748 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 ABCB7O75027 752 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 NKX2-2O95096 273 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 IGKV1D-16P01601 117 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 DDX5P17844 614 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 ENDOUP21128 410 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 IL12BP29460 328 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 KRT20P35900 424 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 MASP1P48740 699 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 PPP2R2AP63151 447 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SNTA1Q13424 505 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 ZNHIT3Q15649 155 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 TIGD3Q6B0B8 471 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 MFSD12Q6NUT3 480 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC30A6Q6NXT4 461 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 CD163Q86VB7 1156 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 CLECL1Q8IZS7 167 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 GOLGA6L1Q8N7Z2 621 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC16A11Q8NCK7 471 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 CEP70Q8NHQ1 597 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 PIWIL2Q8TC59 973 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 TMCO6Q96DC7 493 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 OTUB1Q96FW1 271 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 CCDC120Q96HB5 630 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 MS4A4EQ96PG1 132 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 YIPF4Q9BSR8 244 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 DPY30Q9C005 99 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC6A15Q9H2J7 730 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 UBQLN3Q9H347 655 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 C3orf14Q9HBI5 128 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 Q9N2J8 555 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 AIG1Q9NVV5 245 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 KLRF1Q9NZS2 232 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 C15orf41Q9Y2V0 281 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 SNX8Q9Y5X2 465 aa16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 DIDO1Q9BTC0 2240 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-203ENST00000540017 A1L4Q6 167 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 B4DXG7 233 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 C9JVG2 144 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 NPIPA2E9PIF3 369 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 NPIPA3F8WFD2 350 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 SUSD5O60279 629 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 SCN2BO60939 215 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 CLDN1O95832 211 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 TPOP07202 933 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 GDF1P27539 372 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 PTPN6P29350 595 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 TRPC1P48995 793 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 GAS1P54826 345 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 CASP6P55212 293 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 NME5P56597 212 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 UFM1P61960 85 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 HBA1P69905 142 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 PSPHP78330 225 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 EFR3AQ14156 821 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 DUSP5Q16690 384 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 PAOXQ6QHF9 649 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 GALNT10Q86SR1 603 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 NATD1Q8N6N6 113 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 CDRT4Q8N9R6 151 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 WDSUB1Q8N9V3 476 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 GPR151Q8TDV0 419 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 SLC9A6Q92581 669 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 C7orf26Q96N11 449 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 OR52B2Q96RD2 323 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 LDAHQ9H6V9 325 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 ZCCHC3Q9NUD5 404 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 QPCTLQ9NXS2 382 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms