RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SOD3P08294 240 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 DANCRP0C864 163 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 FCGR2AP12318 317 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 MTHFD2P13995 350 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 HK1P19367 917 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 PNLIPRP2P54317 469 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 GPX6P59796 221 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 DLG1Q12959 904 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 CCNYL2Q5T2Q4 361 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 LARP4Q71RC2 724 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 FADS6Q8N9I5 356 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 L3MBTL4Q8NA19 623 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 OR6K3Q8NGY3 331 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 RAB3IL1Q8TBN0 382 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 TRPC4APQ8TEL6 797 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 CDKL2Q92772 493 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 GTPBP3Q969Y2 492 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 OSBPL9Q96SU4 736 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 CPNE1Q99829 537 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 STMN4Q9H169 189 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 OR10A4Q9H209 315 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 DSN1Q9H410 356 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 IPPKQ9H8X2 491 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 AHSPQ9NZD4 102 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 WHRNQ9P202 907 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 CDC42EP3Q9UKI2 254 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 PSME2Q9UL46 239 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 LIPT1Q9Y234 373 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 GPR52Q9Y2T5 361 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 EMC9Q9Y3B6 208 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 RNF11Q9Y3C5 154 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 UQCRHLA0A096LP55 91 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 HAX1O00165 279 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 TP73O15350 636 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 ADAM11O75078 769 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 BCAS2O75934 225 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 URI1O94763 535 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 AQP8O94778 261 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CLDN9O95484 217 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 IGHV4-39P01824 125 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 THBS1P07996 1170 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 LTA4HP09960 611 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CT45A8P0DMV1 189 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CT45A9P0DMV2 189 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 KRT20P35900 424 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CDKN1AP38936 164 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 GP5P40197 560 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 MAPK12P53778 367 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CLDN20P56880 219 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 RPS3AP61247 264 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 PSPHP78330 225 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 SGCBQ16585 318 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 CT45A2Q5DJT8 189 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 RAET1LQ5VY80 246 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 BEND4Q6ZU67 534 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 RAPH1Q70E73 1250 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 PAGE2Q7Z2X7 111 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 ZBED8Q8IZ13 594 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 METTL25Q8N6Q8 603 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 OR2M3Q8NG83 312 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 GFM2Q969S9 779 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 FBXW5Q969U6 566 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 BTBD9Q96Q07 612 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 ACTR6Q9GZN1 396 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 PPP4R1LQ9P1A2 415 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 ACOT9Q9Y305 439 aa10.42□□□□□ -0.74
CLSTN3-209ENST00000539982 OR2M5A3KFT3 312 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 C17orf51A8MQB3 221 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 H3BML4 177 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GPRIN2O60269 458 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 SEC31AO94979 1220 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 PLGP00747 810 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 PCSK2P16519 638 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 IL12BP29460 328 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 SSTR1P30872 391 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 SPRP35270 261 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 THBS2P35442 1172 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 PIK3CGP48736 1102 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 ALDH18A1P54886 795 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 CTBP2P56545 445 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 CORO7P57737 925 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 MRPS22P82650 360 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 MRPS35P82673 323 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 DUSP2Q05923 314 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GTF2H2Q13888 395 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GANABQ14697 944 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 LTB4RQ15722 352 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 PFKFB4Q16877 469 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 CTU2Q2VPK5 515 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GLYR1Q49A26 553 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GTF2H2CQ6P1K8 395 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 DNAJC14Q6Y2X3 702 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 CYS1Q717R9 158 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 GOLGA7Q7Z5G4 137 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 TBC1D1Q86TI0 1168 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 METTL4Q8N3J2 472 aa10.41□□□□□ -0.74
CLSTN3-209ENST00000539982 OR5M1Q8NGP8 315 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms