RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TRMT12Q53H54 448 aaKnown RBP10.96□□□□□ -0.65
VTN-202ENST00000539746 ZNF311Q5JNZ3 666 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 COX20Q5RI15 118 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 RNF220Q5VTB9 566 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 PLAG1Q6DJT9 500 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 DHRS4L2Q6PKH6 230 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 FAM198BQ6UWH4 519 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ERMP1Q7Z2K6 904 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ZNF550Q7Z398 422 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ZDHHC13Q8IUH4 622 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.65
VTN-202ENST00000539746 SLC34A3Q8N130 599 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 FAM156AQ8NDB6 213 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 TMEM52Q8NDY8 209 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 C16orf52Q8NHV5 167 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 EME1Q96AY2 570 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 GIMAP5Q96F15 307 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 TPD52L3Q96J77 140 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 COL21A1Q96P44 957 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 CHID1Q9BWS9 393 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 DEFB126Q9BYW3 111 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ZNF350Q9GZX5 532 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 SAP130Q9H0E3 1048 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ANKRD19PQ9H560 264 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 IKZF5Q9H5V7 419 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 SOX17Q9H6I2 414 aaPredicted RBP10.96□□□□□ -0.65
VTN-202ENST00000539746 REEP1Q9H902 201 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 UBQLN4Q9NRR5 601 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 TCFL5Q9UL49 500 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 ABCG2Q9UNQ0 655 aa10.96□□□□□ -0.65
VTN-202ENST00000539746 UNC13CQ8NB66 2214 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 SPAARA0A1B0GVQ0 90 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 M0QX08 132 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 AP3D1O14617 1153 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 TM4SF5O14894 197 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CLOCKO15516 846 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 KIAA0513O60268 411 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 E2F6O75461 281 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 PRKD3O94806 890 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 H6PDO95479 791 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CST1P01037 141 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 THRBP10828 461 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 RHCEP18577 417 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ATP6V1B2P21281 511 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 RRM2P31350 389 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 SLC6A8P48029 635 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 PNLIPRP2P54317 469 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 EEF1A2Q05639 463 aaKnown RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 PLCXD2Q0VAA5 305 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 MGAT2Q10469 447 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ATP6AP1Q15904 470 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CRTC2Q53ET0 693 aaPredicted RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 FBXW10Q5XX13 1052 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 FAM111BQ6SJ93 734 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 OPN5Q6U736 354 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ZDHHC21Q8IVQ6 265 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 PRSS58Q8IYP2 241 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ZNF615Q8N8J6 731 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 ZSCAN1Q8NBB4 408 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 SLC16A11Q8NCK7 471 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 OR52P1PQ8NH57 321 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CANT1Q8WVQ1 401 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 PYDC1Q8WXC3 89 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 THAP4Q8WY91 577 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CDS1Q92903 461 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 HSH2DQ96JZ2 352 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 RDH12Q96NR8 316 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 CCNL2Q96S94 520 aaPredicted RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 SECISBP2Q96T21 854 aaKnown RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 GPN2Q9H9Y4 310 aaPredicted RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 MMP25Q9NPA2 562 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 TMCC3Q9ULS5 477 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 GPR55Q9Y2T6 319 aaPredicted RBP10.95□□□□□ -0.66
VTN-202ENST00000539746 NEUROG3Q9Y4Z2 214 aa10.95□□□□□ -0.66
VTN-202ENST00000539746 DSPPQ9NZW4 1301 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 AGAP5A6NIR3 686 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 C9orf172C9J069 976 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 H0Y3Z8 333 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 TIAF1O95411 115 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 IL33O95760 270 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 PABPC4LP0CB38 370 aaKnown RBP10.94□□□□□ -0.66
VTN-202ENST00000539746 NID1P14543 1247 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 CD1EP15812 388 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 NCK1P16333 377 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 ITIH1P19827 911 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 CD247P20963 164 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 DLSTP36957 453 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 CASRP41180 1078 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 MAP3K8P41279 467 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 MAGEA2P43356 314 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 ATP12AP54707 1039 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 SLC26A5P58743 744 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 COPZ1P61923 177 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 ERV3-1Q14264 604 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 RTP5Q14D33 572 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 TRIP10Q15642 601 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 DUSP5Q16690 384 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 ZNF750Q32MQ0 723 aa10.94□□□□□ -0.66
VTN-202ENST00000539746 EXOSC6Q5RKV6 272 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms