RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CRATP43155 626 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CCT3P49368 545 aaKnown RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 SEPHS1P49903 392 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 NCBP2P52298 156 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDB1-213ENST00000539332 MLLT10P55197 1068 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 DSTNP60981 165 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 TUBA1BP68363 451 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CDK6Q00534 326 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SELENBP1Q13228 472 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SCARB2Q14108 478 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 KCNAB1Q14722 419 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CTF1Q16619 201 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CRB2Q5IJ48 1285 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 TUBA1AQ71U36 451 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 PIWIL3Q7Z3Z3 882 aaKnown RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 C6orf120Q7Z4R8 191 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 KMT5CQ86Y97 462 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SVOPQ8N4V2 548 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 HORMAD2Q8N7B1 307 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SETD9Q8NE22 299 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 RASSF5Q8WWW0 418 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 MAL2Q969L2 176 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 SLC41A2Q96JW4 573 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 BBS4Q96RK4 519 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 DPYSL5Q9BPU6 564 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 TMEM121BQ9BXQ6 578 aaPredicted RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 OR2B2Q9GZK3 357 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 NDEL1Q9GZM8 345 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 CCNB1IP1Q9NPC3 277 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 IL1RAPQ9NPH3 570 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 THUMPD1Q9NXG2 353 aaKnown RBP8.28□□□□□ -1.08
DDB1-213ENST00000539332 DNAJB9Q9UBS3 223 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 C3orf18Q9UK00 162 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 HSPE1-MOB4S4R3N1 261 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 V9GYQ6 96 aa8.28□□□□□ -1.08
DDB1-213ENST00000539332 IGHV5-10-1A0A0J9YXX1 117 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 A0A1W2PS29 197 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 GLOD5A6NK44 160 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 D6RAR5 112 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 PROB1E7EW31 1015 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 HMGN4O00479 90 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 NTN3O00634 580 aaPredicted RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 DNAJB6O75190 326 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 MED26O95402 600 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 NADKO95544 446 aaPredicted RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 CTSBP07858 339 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ANKRD34CP0C6C1 535 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ELK4P28324 431 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 TLX1P31314 330 aaPredicted RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 RYKP34925 604 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 SOX18P35713 384 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 YAP1P46937 504 aaKnown RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 GCGRP47871 477 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ARL4DP49703 201 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 TPTEP56180 551 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 RAB38P57729 211 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 AQP6Q13520 282 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 FAM53BQ14153 422 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 MAPK11Q15759 364 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ATAD3BQ5T9A4 648 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 GARNL3Q5VVW2 1013 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 CA13Q8N1Q1 262 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 D2HGDHQ8N465 521 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 CHDHQ8NE62 594 aaPredicted RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 OR56A1Q8NGH5 318 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 RORBQ92753 470 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 SLC35G5Q96KT7 338 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 C7orf34Q96L11 122 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 DACH2Q96NX9 599 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 GFM1Q96RP9 751 aaKnown RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 HOXD1Q9GZZ0 328 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ZNF768Q9H5H4 540 aaKnown RBP8.27□□□□□ -1.08
DDB1-213ENST00000539332 SEMA3GQ9NS98 782 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 STARD5Q9NSY2 213 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 GIMAP4Q9NUV9 329 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ZNF229Q9UJW7 825 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 PLCL2Q9UPR0 1127 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 MAP4K5Q9Y4K4 846 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 ORC6Q9Y5N6 252 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 SNX8Q9Y5X2 465 aa8.27□□□□□ -1.08
DDB1-213ENST00000539332 EMC8O43402 210 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 KLF4O43474 513 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 FOXS1O43638 330 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 ERAL1O75616 437 aaKnown RBP8.27□□□□□ -1.09
DDB1-213ENST00000539332 UPK1BO75841 260 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 SLITRK5O94991 958 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 MT-ND1P03886 318 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 FHP07954 510 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 MPIP34949 423 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 CXCR4P61073 352 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 KCNJ10P78508 379 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 ZNF750Q32MQ0 723 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 TCTE1Q5JU00 501 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 EXOSC6Q5RKV6 272 aaKnown RBP8.27□□□□□ -1.09
DDB1-213ENST00000539332 STPG1Q5TH74 334 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 REEP3Q6NUK4 255 aa8.27□□□□□ -1.09
DDB1-213ENST00000539332 BHLHB9Q6PI77 547 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms