RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ADOQ96SZ5 270 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 LMF2Q9BU23 707 aaKnown RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 TRIM8Q9BZR9 551 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 OR2B2Q9GZK3 357 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 GALNT9Q9HCQ5 603 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 Q9N2J8 555 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 KCNJ16Q9NPI9 418 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 ACSS1Q9NUB1 689 aaPredicted RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 MRTO4Q9UKD2 239 aaKnown RBP10.55□□□□□ -0.72
RTN3-209ENST00000538995 ABCG2Q9UNQ0 655 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 WIF1Q9Y5W5 379 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 FBN2P35556 2912 aa10.55□□□□□ -0.72
RTN3-209ENST00000538995 CSMD1Q96PZ7 3565 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 EXPH5Q8NEV8 1989 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 TM9SF1O15321 606 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 CTIFO43310 598 aaKnown RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 TOXO94900 526 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 SNUPNO95149 360 aaKnown RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 ACTL6AO96019 429 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 BCKDHAP12694 445 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 CREB1P16220 341 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 MSX1P28360 303 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 SSTR2P30874 369 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 HPCAL1P37235 193 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 KIR3DL1P43629 444 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 PSMD4P55036 377 aaKnown RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 DECR1Q16698 335 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 SLC25A35Q3KQZ1 300 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 GALNTL6Q49A17 601 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 ACSF3Q4G176 576 aaPredicted RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 ZCCHC23Q6ZST2 131 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 PLCZ1Q86YW0 608 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 LACC1Q8IV20 430 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 CCDC71Q8IV32 467 aaPredicted RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 WDSUB1Q8N9V3 476 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 FAM83FQ8NEG4 500 aaPredicted RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 OR10Q1Q8NGQ4 319 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 C14orf79Q96F83 325 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 ZIM3Q96PE6 472 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 TSSK3Q96PN8 268 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 TIMP4Q99727 224 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 UGT2B28Q9BY64 529 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 SLC24A3Q9HC58 644 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 NTMQ9P121 344 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 CBLCQ9ULV8 474 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 MRPS18CQ9Y3D5 142 aaKnown RBP10.54□□□□□ -0.72
RTN3-209ENST00000538995 ACTL7BQ9Y614 415 aa10.54□□□□□ -0.72
RTN3-209ENST00000538995 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 A0A0G2JNJ9 132 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 HSPB2A8KAH6 182 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 BIRC5O15392 142 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 LYPLA1O75608 230 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 EPPINO95925 133 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SERPINE1P05121 402 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 BMP7P18075 431 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 GRK2P25098 689 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SRD5A2P31213 254 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 ARRB2P32121 409 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 EVI2BP34910 448 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 GPC1P35052 558 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 TIMP3P35625 211 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 ADH7P40394 386 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SERPINB4P48594 390 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 HSPB3Q12988 150 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 MLC1Q15049 377 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 TOMM20Q15388 145 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 HSPB2Q16082 182 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 VPS26BQ4G0F5 336 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 ATP6AP1LQ52LC2 224 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 EIPR1Q53HC9 387 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 WIPI1Q5MNZ9 446 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 NUDCD3Q8IVD9 361 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 CEP70Q8NHQ1 597 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 PPP1R14CQ8TAE6 165 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 HOXB13Q92826 284 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 ABTB1Q969K4 478 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 GFM2Q969S9 779 aaKnown RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 EFHD2Q96C19 240 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 HHATLQ9HCP6 504 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SERHLQ9NQF3 203 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 NPDC1Q9NQX5 325 aaPredicted RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 FAM120CQ9NX05 1096 aaKnown RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 ALKBH4Q9NXW9 302 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SH3BP4Q9P0V3 963 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 Q9UFV3 132 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 ATP6V1HQ9UI12 483 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 MAPRE3Q9UPY8 281 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 SLC6A5Q9Y345 797 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 EML6Q6ZMW3 1958 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 PHF3Q92576 2039 aaKnown RBP10.53□□□□□ -0.72
RTN3-209ENST00000538995 DCHS2Q6V1P9 2916 aa10.53□□□□□ -0.72
RTN3-209ENST00000538995 CD8B2A6NJW9 211 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 SCAMP2O15127 329 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 AKAP10O43572 662 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 NME6O75414 186 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms