RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CPTPQ5TA50 214 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 MFSD12Q6NUT3 480 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 CEP70Q8NHQ1 597 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 FAM57AQ8TBR7 257 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 ACTRT2Q8TDY3 377 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 FAM120BQ96EK7 910 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 TEX37Q96LM6 180 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 RILPQ96NA2 401 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 COL21A1Q96P44 957 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 CXorf36Q9H7Y0 433 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 DDX18Q9NVP1 670 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 AIG1Q9NVV5 245 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 BOKQ9UMX3 212 aaPredicted RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 OR14I1A6ND48 311 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 RNASET2O00584 256 aaKnown RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 AQP7O14520 342 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 SNPHO15079 494 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 HCN1O60741 890 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 AGFG2O95081 481 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 IL33O95760 270 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 IGKV1D-16P01601 117 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 ACP2P11117 423 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 IL12AP29459 219 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 MRPL19P49406 292 aaKnown RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 PPP2R2AP63151 447 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 RPP38P78345 283 aaKnown RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 RBPJQ06330 500 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 EFR3AQ14156 821 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 ARHGAP11AQ6P4F7 1023 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 SPATA19Q7Z5L4 167 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 SLC44A2Q8IWA5 706 aaPredicted RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 CDRT4Q8N9R6 151 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 NUP43Q8NFH3 380 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 PHF10Q8WUB8 498 aaKnown RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 PPP1R36Q96LQ0 422 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 DOHHQ9BU89 302 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 DEFB127Q9H1M4 99 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 ATAD3AQ9NVI7 634 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 GPATCH2Q9NW75 528 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 CBLCQ9ULV8 474 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 MRPS18CQ9Y3D5 142 aaKnown RBP12.53□□□□□ -0.4
CD9-208ENST00000538834 PCDHGB3Q9Y5G1 929 aa12.53□□□□□ -0.4
CD9-208ENST00000538834 CENPEQ02224 2701 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 FAM166BA8MTA8 275 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 ACOT7O00154 380 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 REM1O75628 298 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 NGFRP08138 427 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 CYP4B1P13584 511 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 ELAVL4P26378 380 aaKnown RBP12.52□□□□□ -0.41
CD9-208ENST00000538834 EPHA3P29320 983 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 PTGS2P35354 604 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 KCNJ2P63252 427 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 HBA1P69905 142 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 SLC9B1Q4ZJI4 515 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 NHSL2Q5HYW2 709 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 TMEM198Q66K66 360 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 SLC16A11Q8NCK7 471 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.41
CD9-208ENST00000538834 SFXN5Q8TD22 340 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 ZNF597Q96LX8 424 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 MS4A4EQ96PG1 132 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 ADOQ96SZ5 270 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 PRPF18Q99633 342 aaKnown RBP12.52□□□□□ -0.41
CD9-208ENST00000538834 RTN4RQ9BZR6 473 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 C3orf14Q9HBI5 128 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 DUSP22Q9NRW4 184 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 TINAGQ9UJW2 476 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
CD9-208ENST00000538834 GXYLT2A0PJZ3 443 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 E9PLN8 166 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 TGDSO95455 350 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 CLDN1O95832 211 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 C6orf47O95873 294 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
CD9-208ENST00000538834 EFNA1P20827 205 aaPredicted RBP12.51□□□□□ -0.41
CD9-208ENST00000538834 LCN1P31025 176 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 PLGLB1Q02325 96 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 DUSP5Q16690 384 aa12.51□□□□□ -0.41
CD9-208ENST00000538834 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms