RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ZNF517Q6ZMY9 492 aaPredicted RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 ZNF485Q8NCK3 441 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 OR9A2Q8NGT5 310 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 ACOT11Q8WXI4 607 aaPredicted RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 KATNB1Q9BVA0 655 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 MIXL1Q9H2W2 232 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 CNIH4Q9P003 139 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 GPR55Q9Y2T6 319 aaPredicted RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 CHST2Q9Y4C5 530 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 PLEKHM1Q9Y4G2 1056 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 A0A1W2PQ09 198 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 A0A1W2PS29 197 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 CPSF4LA6NMK7 179 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 A8MU76 341 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 ASGR2P07307 311 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 CLEC2LP0C7M8 214 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 FPR3P25089 353 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 HTRA3P83110 453 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 ASAH1Q13510 395 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 RPE65Q16518 533 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 NXNL2Q5VZ03 156 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 TANGO2Q6ICL3 276 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 VITQ6UXI7 678 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 QSOX2Q6ZRP7 698 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 NUDT18Q6ZVK8 323 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 C16orf62Q7Z3J2 963 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 MEX3DQ86XN8 651 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 POGLUT1Q8NBL1 392 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 TOR1AIP2Q8NFQ8 470 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 KLK6Q92876 244 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 FAM46AQ96IP4 442 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 COQ7Q99807 217 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 RERGLQ9H628 205 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 EQTNQ9NQ60 294 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 MED17Q9NVC6 651 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 LYARQ9NX58 379 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 SPHK1Q9NYA1 384 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 APOBEC3BQ9UH17 382 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF221Q9UK13 617 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 RBMX2Q9Y388 322 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 GPSM3Q9Y4H4 160 aa15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 SNRNP200O75643 2136 aaKnown RBP15.02□□□□□ -0.01
CHMP1A-202ENST00000535997 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 AP3D1O14617 1153 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 APOL3O95236 402 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 CHRM5P08912 532 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 AZGP1P25311 298 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 TRHRP34981 398 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 WASP42768 502 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NR4A2P43354 598 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NKX2-5P52952 324 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 ERVK-21P61565 698 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 RPS25P62851 125 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 PDZK1Q5T2W1 519 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF425Q6IV72 752 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 OR52P1PQ8NH57 321 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 ADAMTS15Q8TE58 950 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 KIAA1143Q96AT1 154 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 GIMAP5Q96F15 307 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 TM9SF2Q99805 663 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC22A4Q9H015 551 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 COLEC10Q9Y6Z7 277 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 TRDV1A0A1B0GX56 115 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 FRS3O43559 492 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 TMCC2O75069 709 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 AGR2O95994 175 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 GAAP10253 952 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 FCARP24071 287 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 PEBP1P30086 187 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 RPS5P46782 204 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 CDH11P55287 796 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 MAP4K2Q12851 820 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 DSG2Q14126 1118 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NDUFA5Q16718 116 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 CLEC12AQ5QGZ9 265 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 AADACL4Q5VUY2 407 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 HEPHL1Q6MZM0 1159 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 ADGRD2Q7Z7M1 963 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NRROSQ86YC3 692 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC17A9Q9BYT1 436 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 MTHFD2LQ9H903 347 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 ANKRA2Q9H9E1 313 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NLGN3Q9NZ94 848 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 NTMQ9P121 344 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 YARS2Q9Y2Z4 477 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 HEBP2Q9Y5Z4 205 aa15.01□□□□□ -0.01
CHMP1A-202ENST00000535997 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 SURF4O15260 269 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 FCMRO60667 390 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC1A3P43003 542 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 AVPR1BP47901 424 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 FABP5Q01469 135 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 ACSM1Q08AH1 577 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 SF3B4Q15427 424 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■□□ 15.3
CHMP1A-202ENST00000535997 FAM214AQ32MH5 1076 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF628Q5EBL2 1059 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 HERVK_113Q902F9 699 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms