RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 NR2F6P10588 404 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ACP2P11117 423 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 CPEP16870 476 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 IFNA8P32881 189 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 WNT4P56705 351 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 HOXC5Q00444 222 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ST3GAL3Q11203 375 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ITPRIPL2Q3MIP1 535 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ZNF425Q6IV72 752 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 DGLUCYQ7Z3D6 616 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 LAX1Q8IWV1 398 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 OR8D4Q8NGM9 314 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 CAPSLQ8WWF8 208 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 FGF11Q92914 225 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 COL26A1Q96A83 441 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ZNF681Q96N22 645 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 SLC38A2Q96QD8 506 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ACTRT3Q9BYD9 372 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 KIR3DX1Q9H7L2 352 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
LDLR-203ENST00000535915 LYARQ9NX58 379 aaKnown RBP12.33□□□□□ -0.44
LDLR-203ENST00000535915 CALML5Q9NZT1 146 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 HEBP2Q9Y5Z4 205 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ANKRD34BA5PLL1 514 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 BTN3A3O00478 584 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ASNA1O43681 348 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 UBXN7O94888 489 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 TRHRP34981 398 aaPredicted RBP12.33□□□□□ -0.44
LDLR-203ENST00000535915 RAB40BQ12829 278 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 TSPAN31Q12999 210 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 C6orf132Q5T0Z8 1188 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 C22orf42Q6IC83 251 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 GJD3Q8N144 294 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ADAMTS15Q8TE58 950 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 ASB15Q8WXK1 588 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
LDLR-203ENST00000535915 KLHL28Q9NXS3 571 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 FANCMQ8IYD8 2048 aa12.33□□□□□ -0.44
LDLR-203ENST00000535915 PRSS38A1L453 326 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 PLD2O14939 933 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 FCMRO60667 390 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 ZNF888P0CJ79 500 aaPredicted RBP12.32□□□□□ -0.44
LDLR-203ENST00000535915 MTNR1AP48039 350 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 ADPRHP54922 357 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 CEBPEQ15744 281 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 SPATC1Q76KD6 591 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 SHFQ7M4L6 423 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 LAPTM4BQ86VI4 370 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 PIGXQ8TBF5 258 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 GATAD2BQ8WXI9 593 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 NR4A3Q92570 626 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 DIO2Q92813 273 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 CHST2Q9Y4C5 530 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 TICRRQ7Z2Z1 1910 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 IRGMA1A4Y4 181 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 K7EQS6 105 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 AP3D1O14617 1153 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 NARSO43776 548 aaKnown RBP12.32□□□□□ -0.44
LDLR-203ENST00000535915 SSX4O60224 188 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 EML2O95834 649 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 CH25HO95992 272 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 PDX1P52945 283 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 GAS1P54826 345 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 RGS8P57771 180 aaPredicted RBP12.32□□□□□ -0.44
LDLR-203ENST00000535915 PSPHP78330 225 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 FLYWCH1Q4VC44 716 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 ZMAT1Q5H9K5 638 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 PLEKHM3Q6ZWE6 761 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 CELF2-AS1Q8N7Q2 184 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 FGF14Q92915 247 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 GIMAP5Q96F15 307 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 SLC35A4Q96G79 324 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 OR2M4Q96R27 311 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 PRRG3Q9BZD7 231 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
LDLR-203ENST00000535915 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 TRAPPC4Q9Y296 219 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 NTNG1Q9Y2I2 539 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 CMAHPQ9Y471 501 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 V9GYH0 126 aa12.32□□□□□ -0.44
LDLR-203ENST00000535915 ARHGEF17Q96PE2 2063 aaPredicted RBP12.32□□□□□ -0.44
LDLR-203ENST00000535915 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 BNC1Q01954 994 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 RGS1Q08116 209 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 LARS2Q15031 903 aaKnown RBP12.31□□□□□ -0.44
LDLR-203ENST00000535915 MINDY4Q4G0A6 757 aa12.31□□□□□ -0.44
LDLR-203ENST00000535915 FAM111BQ6SJ93 734 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms