RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 SORT1Q99523 831 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 LMF2Q9BU23 707 aaKnown RBP12.62□□□□□ -0.39
TMEM258-203ENST00000535297 Q9N2J8 555 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PNPLA3Q9NST1 481 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ASIC5Q9NY37 505 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 SPRR3Q9UBC9 169 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PCDHGB3Q9Y5G1 929 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 HRH3Q9Y5N1 445 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 FREM3P0C091 2139 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 GNB5O14775 395 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 WDR1O75083 606 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 ICOSLGO75144 302 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 CLDN14O95500 239 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 ACVR2AP27037 513 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 RPL14P50914 215 aaKnown RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 MANFP55145 182 aaKnown RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 EMX2Q04743 252 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 STX3Q13277 289 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 PTGR1Q14914 329 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 MLC1Q15049 377 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 DECR1Q16698 335 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 IL23RQ5VWK5 629 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 MARVELD2Q8N4S9 558 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 NATD1Q8N6N6 113 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 OR5M9Q8NGP3 310 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 CEP70Q8NHQ1 597 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 HOXB13Q92826 284 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 TLCD1Q96CP7 247 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 GNRHR2Q96P88 292 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 MS4A4EQ96PG1 132 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 C20orf27Q9GZN8 174 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 C3orf14Q9HBI5 128 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 GALNT9Q9HCQ5 603 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 ATAD3AQ9NVI7 634 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 COQ3Q9NZJ6 369 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 NOP53Q9NZM5 478 aaKnown RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 NTMQ9P121 344 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 CBLCQ9ULV8 474 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 EIF3LQ9Y262 564 aaKnown RBP12.61□□□□□ -0.39
TMEM258-203ENST00000535297 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
TMEM258-203ENST00000535297 TRAPPC6AO75865 159 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 HOXD4P09016 255 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 GABRA1P14867 456 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 PRPS1L1P21108 318 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 TRPC1P48995 793 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 PSMD4P55036 377 aaKnown RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 WDR4P57081 412 aaKnown RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 C21orf58P58505 322 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 BST1Q10588 318 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 CASP8Q14790 479 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF630Q2M218 657 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ACAD11Q709F0 780 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 LRRC34Q8IZ02 419 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 CDRT4Q8N9R6 151 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ASB5Q8WWX0 329 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 EFHD2Q96C19 240 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 PRPF18Q99633 342 aaKnown RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 PAIP2Q9BPZ3 127 aaKnown RBP12.6□□□□□ -0.39
TMEM258-203ENST00000535297 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
TMEM258-203ENST00000535297 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 EMC8O43402 210 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CBR3O75828 277 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 NKX2-2O95096 273 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 IL33O95760 270 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 LAMP1P11279 417 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 G6PDP11413 515 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CYP4B1P13584 511 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 HTR1EP28566 365 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 EVI2BP34910 448 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 PTGER4P35408 488 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 MAP3K8P41279 467 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 MAGOHP61326 146 aaKnown RBP12.59□□□□□ -0.39
TMEM258-203ENST00000535297 PRR5P85299 388 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
TMEM258-203ENST00000535297 GAB1Q13480 694 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 TOMM20Q15388 145 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CPTPQ5TA50 214 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 WDR53Q7Z5U6 358 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CAMKMTQ7Z624 323 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 RIMKLAQ8IXN7 391 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 FAM83FQ8NEG4 500 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-203ENST00000535297 NUP43Q8NFH3 380 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms