RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OR9A4Q8NGU2 314 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 L3HYPDHQ96EM0 354 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 APIPQ96GX9 242 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 C5AR2Q9P296 337 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 MCTS1Q9ULC4 181 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 ST14Q9Y5Y6 855 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 CEBPBP17676 345 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 RAB3BP20337 219 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 CRABP1P29762 137 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM53Q6P2H8 277 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 PRR22Q8IZ63 422 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 PPP1R35Q8TAP8 253 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 FAM118AQ9NWS6 357 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 RABL2AQ9UBK7 228 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 RABL2BQ9UNT1 228 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 NDUFB2O95178 105 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 PNMTP11086 282 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 DAP3P51398 398 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 S100A12P80511 92 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF181Q2M3W8 571 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 SGCZQ96LD1 299 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 TP63Q9H3D4 680 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 MTG2Q9H4K7 406 aa17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 MRPL15Q9P015 296 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-203ENST00000535236 A6NIZ1 184 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 EEF1E1-BLOC1S5C9J1V9 151 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 LPLP06858 475 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 CAPN3P20807 821 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 RAP1BP61224 184 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 RAP1AP62834 184 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 C22orf15Q8WYQ4 148 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 FEVQ99581 238 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC39A1Q9NY26 324 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 DNAJC15Q9Y5T4 150 aa17.21■□□□□ 0.34
SFSWAP-203ENST00000535236 TMX2-CTNND1H3BSU7 103 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ITGB7P26010 798 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 TNFRSF4P43489 277 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ARL6IP1Q15041 203 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 DUS1LQ6P1R4 473 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 BORAQ6PGQ7 559 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 TTC9BQ8N6N2 239 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CDC6Q99741 560 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF160Q9HCG1 818 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 UBQLN2Q9UHD9 624 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 MAGED1Q9Y5V3 778 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CDK2P24941 298 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CXCL12P48061 93 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ERVPABLB-1P60509 514 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 STK11Q15831 433 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CYS1Q717R9 158 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 OR51T1Q8NGJ9 327 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 MAL2Q969L2 176 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ARL5BQ96KC2 179 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 OR5B12Q96R08 314 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CD93Q9NPY3 652 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC7A7Q9UM01 511 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 SRPK3Q9UPE1 567 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 SGK494L7N484 410 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 RDH16O75452 317 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 PXNP49023 591 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 RPS26P11Q5JNZ5 115 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 LANCL3Q6ZV70 420 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ABHD12BQ7Z5M8 362 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 OR9A2Q8NGT5 310 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 RHBDF1Q96CC6 855 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF778Q96MU6 729 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 VDAC3Q9Y277 283 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 NPIPB15A6NHN6 443 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CAV3P56539 151 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF33BQ06732 778 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 FAM180BQ6P0A1 224 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 MRPL41Q8IXM3 137 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC35F2Q8IXU6 374 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CENPSQ8N2Z9 138 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 HSPE1-MOB4S4R3N1 261 aa17.2■□□□□ 0.34
SFSWAP-203ENST00000535236 CREBL2O60519 120 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 ACTBP60709 375 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 ACTG1P63261 375 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 SH3BP2P78314 561 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 KIR2DS3Q14952 304 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 LCTLQ6UWM7 567 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 SAMD8Q96LT4 415 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 IL20RAQ9UHF4 553 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 GPR52Q9Y2T5 361 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 A0A0A6YYC8 382 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 IGKV6-21A0A0C4DH24 114 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 OR52A4PA6NMU1 304 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 I3L1I5 382 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 TNFSF4P23510 183 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 NUDT1P36639 197 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CSNK2A1P68400 391 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 COQ5Q5HYK3 327 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 IGFN1Q86VF2 1251 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CCDC71LQ8N9Z2 235 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CSNK2A3Q8NEV1 391 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms