RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TAF10	Q12962	218 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MFAP5	Q13361	173 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RBMY1F	Q15415	496 aa	Known RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZBTB6	Q15916	424 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PHLDA2	Q53GA4	152 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FAM120AOS	Q5T036	256 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	C9orf64	Q5T6V5	341 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RUSC1-AS1	Q66K80	236 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TRIM65	Q6PJ69	517 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CASC1	Q6TDU7	716 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ENPP7	Q6UWV6	458 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HORMAD1	Q86X24	394 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GKN2	Q86XP6	184 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DOLPP1	Q86YN1	238 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SPATA2L	Q8IUW3	424 aa	Predicted RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TUSC5	Q8IXB3	177 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GPALPP1	Q8IXQ4	340 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	KLHL7	Q8IXQ5	586 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CFAP206	Q8IYR0	622 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SYCP3	Q8IZU3	236 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	THAP8	Q8NA92	274 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	UXS1	Q8NBZ7	420 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CATSPER1	Q8NEC5	780 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IRGQ	Q8WZA9	623 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ELMO2	Q96JJ3	720 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SGK494	Q96LW2	274 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF396	Q96N95	335 aa	Predicted RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ACBD6	Q9BR61	282 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SLC2A11	Q9BYW1	496 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LSM7	Q9UK45	103 aa	Known RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FARSA	Q9Y285	508 aa	Known RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ASPDH	A6ND91	283 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442		G3V4G9	280 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442		K7ERI5	159 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TULP2	O00295	520 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RAD51B	O15315	384 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ST8SIA3	O43173	380 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ATP6AP2	O75787	350 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PDE9A	O76083	593 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LYPLA2	O95372	231 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MT-ND3	P03897	115 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ALPL	P05186	524 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IGKV2-30	P06310	120 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NGFR	P08138	427 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CTSE	P14091	401 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DAO	P14920	347 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ABO	P16442	354 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	JAK1	P23458	1154 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANXA13	P27216	316 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GNA11	P29992	359 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HLA-F	P30511	346 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CDKN2A	P42771	156 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RGS7	P49802	495 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HTR6	P50406	440 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MAZ	P56270	477 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MTCP1	P56278	107 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MLF1	P58340	268 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NOP14	P78316	857 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF415	Q09FC8	603 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CNTN1	Q12860	1018 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TRIM29	Q14134	588 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	INA	Q16352	499 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TAZ	Q16635	292 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CDO1	Q16878	200 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CLEC12B	Q2HXU8	276 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CTU2	Q2VPK5	515 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	UGT3A2	Q3SY77	523 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	KLHL22	Q53GT1	634 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SEL1L3	Q68CR1	1132 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TXNRD3NB	Q6F5E7	133 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IGFL2	Q6UWQ7	119 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	EID3	Q8N140	333 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	STK40	Q8N2I9	435 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TSPAN18	Q96SJ8	248 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	KRTAP4-9	Q9BYQ8	210 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCSER1	Q9C0I3	900 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NACA2	Q9H009	215 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZMYND12	Q9H0C1	365 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442		Q9H8V8	135 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PTTG2	Q9NZH5	202 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	POU2F3	Q9UKI9	436 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ITGA11	Q9UKX5	1188 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	WDR83OS	Q9Y284	106 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TMED3	Q9Y3Q3	217 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PLCE1	Q9P212	2302 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DNAH7	Q8WXX0	4024 aa		3.98	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NUP210L	Q5VU65	1888 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442		A0A1W2PRB8	838 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TTC26	A0AVF1	554 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC69	A6NI79	296 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DUXA	A6NLW8	204 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PIR	O00625	290 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RASGRF2	O14827	1237 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SYNGR3	O43761	229 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	EDIL3	O43854	480 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LMX1B	O60663	402 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PRAF2	O60831	178 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CTSV	O60911	334 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FCGR3B	O75015	233 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TSPAN12	O95859	305 aa		3.97	□□□□□ -1.77

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