RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	EQTN	Q9NQ60	294 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	KLRF1	Q9NZS2	232 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	SUCO	Q9UBS9	1254 aa	Known RBP	13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	CBLC	Q9ULV8	474 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	LIPG	Q9Y5X9	500 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	COL12A1	Q99715	3063 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	PTPN13	Q12923	2485 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNF407	Q9C0G0	2248 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	TRGV5	A0A0B4J1U4	118 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	PRAMEF25	A6NGN4	478 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	HCN1	O60741	890 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	ZG16	O60844	167 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	TPO	P07202	933 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	ESRRA	P11474	423 aa	Predicted RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	ELAVL4	P26378	380 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	MAP3K8	P41279	467 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	PRR5	P85299	388 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	DECR1	Q16698	335 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	PGS1	Q32NB8	556 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	VPS26B	Q4G0F5	336 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	TIGD3	Q6B0B8	471 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	SZRD1	Q7Z422	152 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	SPATA19	Q7Z5L4	167 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	CDRT4	Q8N9R6	151 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	OR1J4	Q8NGS1	313 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	PSMA8	Q8TAA3	256 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	HOXB13	Q92826	284 aa	Predicted RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	EFHD2	Q96C19	240 aa	Predicted RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	FAM120B	Q96EK7	910 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	GIMAP5	Q96F15	307 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	GNRHR2	Q96P88	292 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	MS4A4E	Q96PG1	132 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	LDAH	Q9H6V9	325 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	GALNT9	Q9HCQ5	603 aa		13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	MRTO4	Q9UKD2	239 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-231	ENST00000534382	USP9Y	O00507	2555 aa	Predicted RBP	13.27	□□□□□ -0.28
CTSB-231	ENST00000534382	DNAJC13	O75165	2243 aa		13.27	□□□□□ -0.28
CTSB-231	ENST00000534382	SPTAN1	Q13813	2472 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	DOPEY1	Q5JWR5	2465 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GOLGA8Q	A0A0J9YX86	632 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GOLGA8O	A6NCC3	632 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	C2orf72	A6NCS6	295 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	OR14I1	A6ND48	311 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	NPIPA2	E9PIF3	369 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382		E9PLN8	166 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GOLGA8N	F8WBI6	632 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	NPIPA3	F8WFD2	350 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	AQP7	O14520	342 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GNB5	O14775	395 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	SNPH	O15079	494 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ANKRD28	O15084	1053 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	SASH3	O75995	380 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	NKX2-2	O95096	273 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	C6orf47	O95873	294 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	CYP4B1	P13584	511 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GDF1	P27539	372 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	EPHA3	P29320	983 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	MAN2A2	P49641	1150 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	PRIM2	P49643	509 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	PSMD4	P55036	377 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	MFSD12	Q6NUT3	480 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ZCCHC12	Q6PEW1	402 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ANGPTL8	Q6UXH0	198 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	CD163	Q86VB7	1156 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	EID3	Q8N140	333 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	PIWIL2	Q8TC59	973 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	GPR151	Q8TDV0	419 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	RNF138	Q8WVD3	245 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	SLC9A6	Q92581	669 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	CCDC120	Q96HB5	630 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	MAEL	Q96JY0	434 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	PHF12	Q96QT6	1004 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	VKORC1	Q9BQB6	163 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	UBQLN3	Q9H347	655 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	EXO5	Q9H790	373 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	NEUROD4	Q9HD90	331 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	C15orf41	Q9Y2V0	281 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	MEMO1	Q9Y316	297 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	SNX8	Q9Y5X2	465 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ASH1L	Q9NR48	2969 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	EXPH5	Q8NEV8	1989 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	ICE1	Q9Y2F5	2266 aa		13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	SPTBN1	Q01082	2364 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-231	ENST00000534382	HECTD1	Q9ULT8	2610 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	GXYLT2	A0PJZ3	443 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	BCKDK	O14874	412 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	CFLAR	O15519	480 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	TRAPPC6A	O75865	159 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	KCNH1	O95259	989 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	IL33	O95760	270 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	ALDOC	P09972	364 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	ACP2	P11117	423 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	PTPN6	P29350	595 aa		13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	CCT3	P49368	545 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	CLNS1A	P54105	237 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-231	ENST00000534382	PPP2R2A	P63151	447 aa		13.26	□□□□□ -0.29

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