RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RMND5AQ9H871 391 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 GPATCH2Q9NW75 528 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 CTSFQ9UBX1 484 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 FITM1A5D6W6 292 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PTGES3LE9PB15 166 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF701M0R085 212 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SLC1A7O00341 560 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 QSOX1O00391 747 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SAP18O00422 153 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SLC16A5O15375 505 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 INMTO95050 263 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 GPX2P18283 190 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TNFRSF1BP20333 461 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 MAGP20916 626 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PRPS1L1P21108 318 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 MEF2AQ02078 507 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 AQP6Q13520 282 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SMN1Q16637 294 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PRSS53Q2L4Q9 553 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 VMACQ2NL98 169 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 FAM214AQ32MH5 1076 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF691Q5VV52 312 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 NDUFAF7Q7L592 441 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 FAM20CQ8IXL6 584 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SVOPLQ8N434 492 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 OR7G3Q8NG95 312 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PSMF1Q92530 271 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 HDAC2Q92769 488 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SDCCAG3Q96C92 435 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 DGCR6LQ9BY27 220 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 YTHDF1Q9BYJ9 559 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 RNF32Q9H0A6 362 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 IL1RAPQ9NPH3 570 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TMEM184CQ9NVA4 438 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PLAGL1Q9UM63 463 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 MRPS2Q9Y399 296 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TMED5Q9Y3A6 229 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 A0A1W2PQ72 361 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 C1orf226A1L170 272 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 PRICKLE3O43900 615 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 PCDH7O60245 1069 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CCNDBP1O95273 360 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 FKBP9O95302 570 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SERPINA7P05543 415 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 INHBBP09529 407 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 JUNBP17275 347 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 PCMT1P22061 227 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 FMO3P31513 532 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 KDELR2P33947 212 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR1D4P47884 311 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CLK3P49761 638 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 GP2P55259 537 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ADORA2A-AS1P86434 159 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OCA2Q04671 838 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 MPEG1Q2M385 716 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 COX20Q5RI15 118 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 LIPJQ5W064 366 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 TTC23Q5W5X9 447 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 FAM180BQ6P0A1 224 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 TTC23LQ6PF05 361 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 FIGLAQ6QHK4 219 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SLC16A12Q6ZSM3 486 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 NEK10Q6ZWH5 1172 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 TMPRSS11BQ86T26 416 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 MMP21Q8N119 569 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 EID3Q8N140 333 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF740Q8NDX6 193 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR4K1Q8NGD4 311 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR8J2Q8NGG1 315 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF420Q8TAQ5 688 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 BRIX1Q8TDN6 353 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF480Q8WV37 535 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SLC22A18Q96BI1 424 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 POM121Q96HA1 1249 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 HSH2DQ96JZ2 352 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 PTGFRNQ9P2B2 879 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 KLHL20Q9Y2M5 609 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 NSG1A0A0A6YYJ2 146 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 MYO1GB0I1T2 1018 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 H0YIV9 168 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SCAMP2O15127 329 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ABCB1P08183 1280 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 COX6A1P12074 109 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 IL1RNP18510 177 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 IGFBP5P24593 272 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CALRP27797 417 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 RAB28P51157 221 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 MVDP53602 400 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 RPS13P62277 151 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 IL1RL1Q01638 556 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ACSM2AQ08AH3 577 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CSTF3Q12996 717 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CDK5R2Q13319 367 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 TSTA3Q13630 321 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SPCS2Q15005 226 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SYTL3Q4VX76 610 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms