RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 MIR1-1HGQ9H1L0 117 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 LIPT1Q9Y234 373 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 CFL2Q9Y281 166 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 MDC1Q14676 2089 aaKnown RBP14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 CENPVL1A0A0U1RR11 272 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC35G6P0C7Q6 338 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 UGT2B7P16662 529 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 SMSP52788 366 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 ZNF45Q02386 682 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 CLEC12AQ5QGZ9 265 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 LIPKQ5VXJ0 399 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 PHC2Q8IXK0 858 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 OR10G6Q8NH81 332 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC9A6Q92581 669 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 ASPNQ9BXN1 380 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 ANKMY1Q9P2S6 941 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 PAIP2BQ9ULR5 123 aaKnown RBP14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 DIMT1Q9UNQ2 313 aaKnown RBP14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 MRPS2Q9Y399 296 aaKnown RBP14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 PEX16Q9Y5Y5 336 aa14.35□□□□□ -0.11
CACNA1E-208ENST00000533229 ZNF860A6NHJ4 632 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 ALOX5P09917 674 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 ACADMP11310 421 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 GSTM3P21266 225 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 SOX6P35712 828 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 TGM4P49221 684 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 ID2Q02363 134 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 TSPAN31Q12999 210 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 GPR18Q14330 331 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 TRAM2Q15035 370 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 ZNF181Q2M3W8 571 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 FAM214AQ32MH5 1076 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 TRMT12Q53H54 448 aaKnown RBP14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 AGAP7PQ5VUJ5 663 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC27A4Q6P1M0 643 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 ZNF730Q6ZMV8 503 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 PRSS41Q7RTY9 318 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 MRGPREQ86SM8 312 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 TWSG1Q9GZX9 223 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 NUAK2Q9H093 628 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 NDUFB11Q9NX14 153 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 NTMQ9P121 344 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 PILRAQ9UKJ1 303 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 DAPP1Q9UN19 280 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 NCKAP1Q9Y2A7 1128 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 UGT2A1Q9Y4X1 527 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 MYO9BQ13459 2157 aa14.34□□□□□ -0.11
CACNA1E-208ENST00000533229 OR6C74A6NCV1 312 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 LRRTM2O43300 516 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 TNFSF14O43557 240 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 NDUFV2P19404 249 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 PTNP21246 168 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 PSMA1P25786 263 aaKnown RBP14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 PRKAR1BP31321 381 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 LSSP48449 732 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 ST3GAL3Q11203 375 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 KIR2DS3Q14952 304 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 DUSP5Q16690 384 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 ALG11Q2TAA5 492 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 CCNJQ5T5M9 372 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 OR2G6Q5TZ20 316 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 CDC73Q6P1J9 531 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 NCCRP1Q6ZVX7 275 aaPredicted RBP14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 USP30Q70CQ3 517 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 CCDC190Q86UF4 302 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 OR2L13Q8N349 312 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 FRMD1Q8N878 549 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 OR4K14Q8NGD5 310 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 TMEM163Q8TC26 289 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 HTRA1Q92743 480 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC22A18Q96BI1 424 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SDHCQ99643 169 aaPredicted RBP14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 CALML5Q9NZT1 146 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SLC13A4Q9UKG4 626 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SCML1Q9UN30 329 aa14.33□□□□□ -0.11
CACNA1E-208ENST00000533229 SCN3AQ9NY46 2000 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 ISPDA4D126 451 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 GSAPA4D1B5 854 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 SAGE2PA6NJ88 616 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 MYL12BO14950 172 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 APBB3O95704 486 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 RAB36O95755 333 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 CCNYL3P0C7X3 344 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 PVRP15151 417 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 MLLT11Q13015 90 aaPredicted RBP14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 ADAM15Q13444 863 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 SUZ12Q15022 739 aaKnown RBP14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 FIGLAQ6QHK4 219 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 SHFQ7M4L6 423 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 POC5Q8NA72 575 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 TEX47Q8TBZ9 253 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 TMEM255BQ8WV15 326 aa14.33□□□□□ -0.12
CACNA1E-208ENST00000533229 TM9SF4Q92544 642 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms