RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ICOSLGO75144 302 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 TRAPPC6AO75865 159 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 HOXD4P09016 255 aaPredicted RBP17.28■□□□□ 0.36
SSH3-209ENST00000532600 ANXA4P09525 319 aaPredicted RBP17.28■□□□□ 0.36
SSH3-209ENST00000532600 LINC00032P0C843 101 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 GABRA1P14867 456 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 MASP1P48740 699 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 PLCXD2Q0VAA5 305 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 ACSF3Q4G176 576 aaPredicted RBP17.28■□□□□ 0.36
SSH3-209ENST00000532600 NHSL2Q5HYW2 709 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 WIPI1Q5MNZ9 446 aaPredicted RBP17.28■□□□□ 0.36
SSH3-209ENST00000532600 RIPPLY2Q5TAB7 128 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 VASNQ6EMK4 673 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 FAM71E1Q6IPT2 247 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 POMZP3Q6PJE2 187 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 ANGPTL8Q6UXH0 198 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 WDSUB1Q8N9V3 476 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 OR7G2Q8NG99 324 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 RAB3IL1Q8TBN0 382 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 TMBIM1Q969X1 311 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 C3orf30Q96M34 536 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 UGT2B28Q9BY64 529 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 PRDM14Q9GZV8 571 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 MCCC2Q9HCC0 563 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 MED4Q9NPJ6 270 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 PRODH2Q9UF12 536 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 KLF11O14901 512 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 SNPHO15079 494 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 BMP7P18075 431 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 POU3F2P20265 443 aaPredicted RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 DDCP20711 480 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 ELAVL4P26378 380 aaKnown RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 DCAF7P61962 342 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 XKR7Q5GH72 579 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 LIX1Q8N485 282 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 RELL2Q8NC24 303 aaPredicted RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 TNIP2Q8NFZ5 429 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 RNF138Q8WVD3 245 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 SLC35A4Q96G79 324 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 OSBPL11Q9BXB4 747 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 METTL7AQ9H8H3 244 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 PFDN4Q9NQP4 134 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 INTS9Q9NV88 658 aaKnown RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 THAP1Q9NVV9 213 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 GIMAP2Q9UG22 337 aa17.27■□□□□ 0.36
SSH3-209ENST00000532600 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 POLR3HQ9Y535 204 aaPredicted RBP17.27■□□□□ 0.36
SSH3-209ENST00000532600 C17orf51A8MQB3 221 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 MYO1GB0I1T2 1018 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 NPIPB8E9PQR5 432 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 PLOD3O60568 738 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 TSPAN2O60636 221 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 SKAP2O75563 359 aaPredicted RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 RSL1D1O76021 490 aaKnown RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 EPPINO95925 133 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 CEACAM8P31997 349 aaPredicted RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 RPP38P78345 283 aaKnown RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 ZNF763Q0D2J5 394 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 HEPACAMQ14CZ8 416 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 KIAA0040Q15053 153 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 SPDYAQ5MJ70 313 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 ATG16L1Q676U5 607 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 SLC30A6Q6NXT4 461 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 YRDCQ86U90 279 aaKnown RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 DDIASQ8IXT1 998 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 FAM83FQ8NEG4 500 aaPredicted RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 OR4N2Q8NGD1 307 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 OR1J4Q8NGS1 313 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 CKAP2Q8WWK9 683 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 ERP27Q96DN0 273 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 WDYHV1Q96HA8 205 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 FOLH1BQ9HBA9 442 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 SLCO1B3Q9NPD5 702 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 MAPRE3Q9UPY8 281 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 ANKRD17O75179 2603 aaKnown RBP17.26■□□□□ 0.35
SSH3-209ENST00000532600 CELSR1Q9NYQ6 3014 aa17.26■□□□□ 0.35
SSH3-209ENST00000532600 PRAMEF25A6NGN4 478 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 OR6C70A6NIJ9 312 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 AHRRA9YTQ3 701 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 SLC28A1O00337 649 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 LSM1O15116 133 aaKnown RBP17.25■□□□□ 0.35
SSH3-209ENST00000532600 PRPH2P23942 346 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 TACR1P25103 407 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 RPL14P50914 215 aaKnown RBP17.25■□□□□ 0.35
SSH3-209ENST00000532600 C2orf80Q0P641 193 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 SNTA1Q13424 505 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 SNTB1Q13884 538 aaKnown RBP17.25■□□□□ 0.35
SSH3-209ENST00000532600 PDCD2Q16342 344 aaPredicted RBP17.25■□□□□ 0.35
SSH3-209ENST00000532600 IMPG1Q17R60 797 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 FAM9CQ8IZT9 166 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 COL21A1Q96P44 957 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 MYNNQ9NPC7 610 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 SERHLQ9NQF3 203 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 TAS2R7Q9NYW3 318 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 L3MBTL1Q9Y468 752 aa17.25■□□□□ 0.35
SSH3-209ENST00000532600 ERN1O75460 977 aaKnown RBP17.24■□□□□ 0.35
SSH3-209ENST00000532600 REM1O75628 298 aa17.24■□□□□ 0.35
SSH3-209ENST00000532600 BCAS2O75934 225 aaPredicted RBP17.24■□□□□ 0.35
SSH3-209ENST00000532600 SNUPNO95149 360 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms