RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ELF4Q99607 663 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 MAP3K3Q99759 626 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 PRTFDC1Q9NRG1 225 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 MAT2BQ9NZL9 334 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 TESQ9UGI8 421 aaKnown RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 SNX11Q9Y5W9 270 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 ZNF99A8MXY4 864 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 H3BSA7 217 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FFAR1O14842 300 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 PCDH17O14917 1159 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FGF17O60258 216 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 MITFO75030 526 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 FAM20BO75063 409 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 RECKO95980 971 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 CYC1P08574 325 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 PVRP15151 417 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 STAT5AP42229 794 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SMSP52788 366 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 CDH15P55291 814 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 DCAF7P61962 342 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SHC2P98077 582 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 MLLT1Q03111 559 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 CHRNEQ04844 493 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 PPP1R8Q12972 351 aaKnown RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 SLC13A2Q13183 592 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 PTGES3Q15185 160 aaKnown RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 NPTX1Q15818 432 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 CTU2Q2VPK5 515 aaKnown RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SYT6Q5T7P8 510 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 SLX4IPQ5VYV7 408 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 LYSMD4Q5XG99 296 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FAM180BQ6P0A1 224 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FRRS1Q6ZNA5 592 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 CLVS1Q8IUQ0 354 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 ENTHD1Q8IYW4 607 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 D2HGDHQ8N465 521 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FAM181AQ8N9Y4 354 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 KAT2AQ92830 837 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 OSTF1Q92882 214 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 UCN3Q969E3 161 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 MUL1Q969V5 352 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 ANKRD9Q96BM1 317 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 ISOC1Q96CN7 298 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 C16orf58Q96GQ5 468 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 CSF3RQ99062 836 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 BARD1Q99728 777 aaKnown RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SOX17Q9H6I2 414 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 FAM60AQ9NP50 221 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 MED17Q9NVC6 651 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 C2orf42Q9NWW7 574 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 SRPK3Q9UPE1 567 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 ZNF443Q9Y2A4 671 aaPredicted RBP11.46□□□□□ -0.57
CHD7-211ENST00000532149 TMEM5Q9Y2B1 443 aa11.46□□□□□ -0.57
CHD7-211ENST00000532149 IGHV1OR21-1A0A087WYE8 117 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 SGK494L7N484 410 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 KIAA0513O60268 411 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 BRINP1O60477 761 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 PRKRAO75569 313 aaKnown RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 GASTP01350 101 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 HBQ1P09105 142 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 NELFEP18615 380 aaKnown RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 TRHRP34981 398 aaPredicted RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 RGS8P57771 180 aaPredicted RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 DUSP2Q05923 314 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 MGAT2Q10469 447 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 FUT5Q11128 374 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 TSPAN31Q12999 210 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD7-211ENST00000532149 PMS2P3Q13401 168 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 GANABQ14697 944 aaKnown RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 TBCEQ15813 527 aaPredicted RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 OCLNQ16625 522 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 DCST2Q5T1A1 773 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 GTF2IRD2BQ6EKJ0 949 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 TYW3Q6IPR3 259 aaKnown RBP11.45□□□□□ -0.58
CHD7-211ENST00000532149 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 KLHL17Q6TDP4 642 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 ZNF550Q7Z398 422 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 B3GNT8Q7Z7M8 397 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 GTF2IRD2Q86UP8 949 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 CDK20Q8IZL9 346 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 CYP4Z2PQ8N1L4 340 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 FRMD1Q8N878 549 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 OR9A4Q8NGU2 314 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 PIGXQ8TBF5 258 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 SLC7A13Q8TCU3 470 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 NAT6Q93015 286 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
CHD7-211ENST00000532149 SLC41A2Q96JW4 573 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms