RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 NPSR1Q6W5P4 371 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 NUP54Q7Z3B4 507 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 C16orf62Q7Z3J2 963 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 RBMXL3Q8N7X1 1067 aaKnown RBP10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 PCYOX1LQ8NBM8 494 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 SLC16A11Q8NCK7 471 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 PSD4Q8NDX1 1056 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 MDS2Q8NDY4 140 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 MIPOL1Q8TD10 442 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 TMBIM1Q969X1 311 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 CMTM5Q96DZ9 223 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 GIMAP5Q96F15 307 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 RMND5BQ96G75 393 aaPredicted RBP10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 YIPF4Q9BSR8 244 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 BTBD2Q9BX70 525 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 HHATLQ9HCP6 504 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 GPATCH2Q9NW75 528 aa10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 THUMPD1Q9NXG2 353 aaKnown RBP10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.91□□□□□ -0.66
PPFIA1-220ENST00000532024 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 EVPLLA8MZ36 301 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 NME2P1O60361 137 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 NPPAP01160 153 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 ACP2P11117 423 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 NME2P22392 152 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 LCN1P31025 176 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 CDKN2CP42773 168 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 RFX3P48380 749 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 CD97P48960 835 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 CLK3P49761 638 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 PNLIPRP2P54317 469 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 NFYCQ13952 458 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 DUSP5Q16690 384 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 NADK2Q4G0N4 442 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 ZNF468Q5VIY5 522 aaPredicted RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 WDR53Q7Z5U6 358 aaPredicted RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 DHDDSQ86SQ9 333 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 PTRH1Q86Y79 214 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 DPP10Q8N608 796 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 POGLUT1Q8NBL1 392 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 CATSPER1Q8NEC5 780 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 OR5M3Q8NGP4 307 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 RP9Q8TA86 221 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 PAQR8Q8TEZ7 354 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 DIO2Q92813 273 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 HOXB13Q92826 284 aaPredicted RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 DTNBP1Q96EV8 351 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 SLC35A4Q96G79 324 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 C16orf58Q96GQ5 468 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 SIGLEC12Q96PQ1 595 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 OR7D2Q96RA2 312 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 ADOQ96SZ5 270 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 METTL7AQ9H8H3 244 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 TPT1P8Q9HAU6 139 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 KLHL1Q9NR64 748 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 GID8Q9NWU2 228 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 ARMCX1Q9P291 453 aa10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 TNRC6AQ8NDV7 1962 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-220ENST00000532024 CNTRLQ7Z7A1 2325 aa10.9□□□□□ -0.67
PPFIA1-220ENST00000532024 ASPDHA6ND91 283 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 MRASO14807 208 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 KALRNO60229 2985 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 NME6O75414 186 aaPredicted RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 RASAL1O95294 804 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 IL33O95760 270 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 HPGDP15428 266 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 MAP3K8P41279 467 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 CRATP43155 626 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 FBXW4P57775 412 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 RPS26P62854 115 aaKnown RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 KCNJ2P63252 427 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 FADDQ13158 208 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 SNTA1Q13424 505 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 GNA13Q14344 377 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 TRMT5Q32P41 509 aaKnown RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 DCST2Q5T1A1 773 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 RPUSD3Q6P087 351 aaKnown RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 TNFAIP8L2Q6P589 184 aaPredicted RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 LYPD8Q6UX82 237 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 GALNTL5Q7Z4T8 443 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 RNF130Q86XS8 419 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 CLEC4FQ8N1N0 589 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 FBXW8Q8N3Y1 598 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 BCORP1Q8N888 145 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 ZNF527Q8NB42 609 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 OR10G3Q8NGC4 313 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 OR52N2Q8NGI0 321 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 PNPT1Q8TCS8 783 aaKnown RBP10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 PIK3R3Q92569 461 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 CDS1Q92903 461 aa10.89□□□□□ -0.67
PPFIA1-220ENST00000532024 EFHD2Q96C19 240 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms