RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 EI24O14681 340 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 TM9SF1O15321 606 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 MTX2O75431 263 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 IGHV3-9P01782 118 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 MT-ND1P03886 318 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 OPN1LWP04000 364 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 CSF2P04141 144 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 UGT2B4P06133 528 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 FCGR3AP08637 254 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 HOXB7P09629 217 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 PDHBP11177 359 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 ANXA3P12429 323 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 UQCRBP14927 111 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 XRCC1P18887 633 aaPredicted RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 ZNF10P21506 573 aaPredicted RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 NT5EP21589 574 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 UGT1A4P22310 534 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 UQCRC2P22695 453 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 ETV5P41161 510 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 BRCC3P46736 316 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 HILS1P60008 231 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 NOP14P78316 857 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 NUCB2P80303 420 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 PJVKQ0ZLH3 352 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 MS4A18Q3C1V0 323 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 CFAP157Q5JU67 520 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 SPATA46Q5T0L3 261 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 TAF3Q5VWG9 929 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 FAM219BQ5XKK7 198 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 DPY19L4Q7Z388 723 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 ZNF329Q86UD4 541 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 LRRTM1Q86UE6 522 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 PARGQ86W56 976 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 SAMD12Q8N8I0 201 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 FNDC8Q8TC99 324 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 RAET1EQ8TD07 263 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 MIPOL1Q8TD10 442 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 LRRC15Q8TF66 581 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 DNASE2BQ8WZ79 361 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 GTF3AQ92664 365 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 POM121L2Q96KW2 1035 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 PSKH2Q96QS6 385 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 HSD17B14Q9BPX1 270 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 FAM173AQ9BQD7 235 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 FGFBP2Q9BYJ0 223 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 DHX33Q9H6R0 707 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 ESM1Q9NQ30 184 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 UTP6Q9NYH9 597 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 SEC14L4Q9UDX3 406 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 MLXQ9UH92 298 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 RARRES3Q9UL19 164 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 RRP15Q9Y3B9 282 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 CACNA1FO60840 1977 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 PPIAL4CA0A0B4J2A2 164 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 IGHV3-16A0A0C4DH30 117 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 TEX48A0A1B0GUV7 120 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 MFSD2BA6NFX1 497 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 FOXI3A8MTJ6 420 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 OR1F1O43749 312 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 DUX1O43812 170 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 BCAS1O75363 584 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 ANP32DO95626 131 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 JCHAINP01591 159 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 OPN1MWP04001 364 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 PPIAL4GP0DN37 164 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 OPN1MW2P0DN77 364 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 OPN1MW3P0DN78 364 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 HNF1AP20823 631 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 IGFBP5P24593 272 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 LMO2P25791 158 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 CALML3P27482 149 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 STK19P49842 368 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 PPT1P50897 306 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ATP12AP54707 1039 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 RPS6P62753 249 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 CBX1P83916 185 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 HYAL1Q12794 435 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 UBE2V2Q15819 145 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 C17orf58Q2M2W7 97 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 CELF3Q5SZQ8 465 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 TTC23Q5W5X9 447 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 PRR5LQ6MZQ0 368 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 RFWD3Q6PCD5 774 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ZNF613Q6PF04 617 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 BTNL3Q6UXE8 466 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 STOX1Q6ZVD7 989 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 TSEN54Q7Z6J9 526 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 ANKRD37Q7Z713 158 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ZNF679Q8IYX0 411 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 ZCCHC7Q8N3Z6 543 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 ZNF248Q8NDW4 579 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 OR52J3Q8NH60 311 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 M1APQ8TC57 530 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 SPRYD4Q8WW59 207 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 FAM3CQ92520 227 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 N4BP2L2Q92802 583 aaPredicted RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 RPL3LQ92901 407 aaKnown RBP2.41□□□□□ -2.02
CD44-234ENST00000531873 ART4Q93070 314 aa2.41□□□□□ -2.02
CD44-234ENST00000531873 WBP1Q96G27 269 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms