RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 VPS29Q9UBQ0 182 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 TRPS1Q9UHF7 1281 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 CES1P1Q9UKY3 287 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 SNX6Q9UNH7 406 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 PPIEQ9UNP9 301 aaKnown RBP6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 PTGDR2Q9Y5Y4 395 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 CLCA3PQ9Y6N3 262 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 CACNA1CQ13936 2221 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 NCKAP5O14513 1909 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 MED12Q93074 2177 aa6.45□□□□□ -1.38
TRIM53CP-201ENST00000531490 FAM90A27PA6NNH2 459 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 WWP2O00308 870 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 PRODHO43272 600 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TYROBPO43914 113 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 NEURL1O76050 574 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 MLYCDO95822 493 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 KRT6AP02538 564 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 KRT6BP04259 564 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CHRNGP07510 517 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CT62P0C5K7 136 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 IGFBP2P18065 325 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 HMOX2P30519 316 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TLX1P31314 330 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ETV4P43268 484 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 STT3AP46977 705 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 KRT6CP48668 564 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CLCN2P51788 898 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 PKNOX1P55347 436 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 PHEXP78562 749 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TNFRSF17Q02223 184 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ALDH6A1Q02252 535 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 DUSP2Q05923 314 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 LTBQ06643 244 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 RCN2Q14257 317 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ZNF267Q14586 743 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ELAVL1Q15717 326 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CEBPEQ15744 281 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 NDUFAF5Q5TEU4 345 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 AGBL2Q5U5Z8 902 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 LIPMQ5VYY2 423 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CLEC6AQ6EIG7 209 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ETV3LQ6ZN32 361 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 Q6ZPB1 254 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ZCCHC23Q6ZST2 131 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 MDGA2Q7Z553 956 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 NUDT13Q86X67 352 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SIAH3Q8IW03 269 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TMEM132CQ8N3T6 1108 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 MARVELD2Q8N4S9 558 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SLC5A8Q8N695 610 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SYT8Q8NBV8 401 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 MDS2Q8NDY4 140 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SIMC1Q8NDZ2 872 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SUN3Q8TAQ9 357 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 FAM76AQ8TAV0 307 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 RDH11Q8TC12 318 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SLC2A12Q8TD20 617 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CCDC126Q96EE4 140 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 C11orf24Q96F05 449 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 RBM18Q96H35 190 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 APOPT1Q96IL0 206 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 DMRTA2Q96SC8 542 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SYT3Q9BQG1 590 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 UTP23Q9BRU9 249 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 BRF2Q9HAW0 419 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ADAP2Q9NPF8 381 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 AHSPQ9NZD4 102 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TEKT2Q9UIF3 430 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 PHF11Q9UIL8 331 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 RPH3AQ9Y2J0 694 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 COA3Q9Y2R0 106 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 FBN1P35555 2871 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TMEM233B4DJY2 109 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 POLR3GO15318 223 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ASNA1O43681 348 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ITGA10O75578 1167 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ERAL1O75616 437 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 OR2J2O76002 312 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ZFAND5O76080 213 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SEMA3DO95025 777 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 CLPSP04118 112 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 IGKV3-11P04433 115 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ENO1P06733 434 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 SP1P08047 785 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 NR2F6P10588 404 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ALOX15P16050 662 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 ABOP16442 354 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 S1PR1P21453 382 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 FEN1P39748 380 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 BUD31P41223 144 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 XKP51811 444 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 NR0B1P51843 470 aaKnown RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 MAPK12P53778 367 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TAS2R50P59544 299 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 AP2B1P63010 937 aa6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 OC90Q02509 493 aaPredicted RBP6.44□□□□□ -1.38
TRIM53CP-201ENST00000531490 TFF3Q07654 80 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms