RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NTMT1Q9BV86 223 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 FOLH1BQ9HBA9 442 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 MAT2BQ9NZL9 334 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 SLC12A4Q9UP95 1085 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ACOT9Q9Y305 439 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 OR10H1Q9Y4A9 318 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 PCDHA9Q9Y5H5 950 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ABCA1O95477 2261 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 C1orf226A1L170 272 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 FRG2CA6NGY1 282 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 FOXE1O00358 373 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 HS3ST1O14792 307 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 PHF1O43189 567 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 NDUFB5O43674 189 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 TNFRSF21O75509 655 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 SEC31AO94979 1220 aaKnown RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CBX7O95931 251 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CGAP01215 116 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CD8BP10966 210 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 LOXP28300 417 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CCKARP32238 428 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 ACVR1BP36896 505 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CDKN1AP38936 164 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 EIF1AXP47813 144 aaKnown RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CLDN20P56880 219 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CORO7P57737 925 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 IRF9Q00978 393 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 DUSP2Q05923 314 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 EFR3AQ14156 821 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 UAP1Q16222 522 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 LGSNQ5TDP6 509 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 SLC48A1Q6P1K1 146 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 CCDC25Q86WR0 208 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 HIPK1Q86Z02 1210 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF611Q8N823 705 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 DUSP19Q8WTR2 217 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 UBTD2Q8WUN7 234 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 TM4SF18Q96CE8 201 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 PHF21BQ96EK2 531 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 MARK4Q96L34 752 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 MCMBPQ9BTE3 642 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 DPH5Q9H2P9 285 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 ELOVL6Q9H5J4 265 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 FANCFQ9NPI8 374 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 SDHAF3Q9NRP4 125 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF701Q9NV72 531 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 GPR55Q9Y2T6 319 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 EMC9Q9Y3B6 208 aa8.31□□□□□ -1.08
NEDD8-206ENST00000531430 MRPS18CQ9Y3D5 142 aaKnown RBP8.31□□□□□ -1.08
NEDD8-206ENST00000531430 TCRBV9S1A1TA0A576 114 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 OR2M5A3KFT3 312 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 A8MV72 311 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 E7ESA3 106 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 TLX2O43763 284 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 UGDHO60701 494 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ADAM11O75078 769 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 MTHFD2P13995 350 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 PPP3CBP16298 524 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 CLK3P49761 638 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 EMDP50402 254 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ALDH18A1P54886 795 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 B3GALT5-AS1P59052 145 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FGFBP1Q14512 234 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ZKSCAN8Q15776 578 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FAM83EQ2M2I3 478 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ERCC6LQ2NKX8 1250 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 MROH9Q5TGP6 573 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FRG2Q64ET8 278 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FAM214BQ7L5A3 538 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 MILR1Q7Z6M3 343 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF619Q8N2I2 560 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 OR4N2Q8NGD1 307 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 UHMK1Q8TAS1 419 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 RAB3IL1Q8TBN0 382 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 GFM2Q969S9 779 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 EXOSC8Q96B26 276 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FRG2BQ96QU4 278 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 TACO1Q9BSH4 297 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 FAIM2Q9BWQ8 316 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ACTR6Q9GZN1 396 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 VPS11Q9H270 941 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 PTGES2Q9H7Z7 377 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 RNF122Q9H9V4 155 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 PSD3Q9NYI0 1048 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 SENP1Q9P0U3 644 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 UTS2RQ9UKP6 389 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 CES1P1Q9UKY3 287 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 LIPT1Q9Y234 373 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 TSC22D4Q9Y3Q8 395 aa8.3□□□□□ -1.08
NEDD8-206ENST00000531430 TNPO3Q9Y5L0 923 aaKnown RBP8.3□□□□□ -1.08
NEDD8-206ENST00000531430 ALPK2Q86TB3 2170 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 A0A1W2PP18 115 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 FAM159BA6NKW6 160 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms