RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 KCNJ5P48544 419 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 ARHGDIAP52565 204 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 VLDLRP98155 873 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 ZNF267Q14586 743 aaPredicted RBP19.71■□□□□ 0.75
VPS28-212ENST00000530836 EXOSC7Q15024 291 aaKnown RBP19.71■□□□□ 0.75
VPS28-212ENST00000530836 ELAVL1Q15717 326 aaKnown RBP19.71■□□□□ 0.75
VPS28-212ENST00000530836 DUSP5Q16690 384 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 VWA2Q5GFL6 755 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 DGAT2L6Q6ZPD8 337 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 COX15Q7KZN9 410 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 CDS1Q92903 461 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 FGF11Q92914 225 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 ART5Q96L15 291 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 LRFN5Q96NI6 719 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 OSBPL10Q9BXB5 764 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 RUBCNLQ9H714 662 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 MTHFD2LQ9H903 347 aaPredicted RBP19.71■□□□□ 0.75
VPS28-212ENST00000530836 KCNE3Q9Y6H6 103 aa19.71■□□□□ 0.75
VPS28-212ENST00000530836 A8MVJ9 347 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 NKX2-2O95096 273 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 CD247P20963 164 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 AGXTP21549 392 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 CD82P27701 267 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 AQP4P55087 323 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 ZNF155Q12901 538 aaPredicted RBP19.7■□□□□ 0.74
VPS28-212ENST00000530836 GK3PQ14409 553 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 NSDHLQ15738 373 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 ZNF385CQ66K41 422 aaPredicted RBP19.7■□□□□ 0.74
VPS28-212ENST00000530836 OVCH1Q7RTY7 1134 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 COX18Q8N8Q8 333 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 SMYD1Q8NB12 490 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 SLC38A9Q8NBW4 561 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 SIMC1Q8NDZ2 872 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 OR5K1Q8NHB7 308 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 TMBIM1Q969X1 311 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 OTUB1Q96FW1 271 aaPredicted RBP19.7■□□□□ 0.74
VPS28-212ENST00000530836 ZNF354BQ96LW1 612 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 SLC38A1Q9H2H9 487 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 Q9H521 79 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 SLC22A11Q9NSA0 550 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 MKL2Q9ULH7 1088 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 CFL2Q9Y281 166 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 HEMK1Q9Y5R4 338 aaPredicted RBP19.7■□□□□ 0.74
VPS28-212ENST00000530836 CHD8Q9HCK8 2581 aa19.7■□□□□ 0.74
VPS28-212ENST00000530836 C17orf105B2RV13 164 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 G3V2T6 193 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ACOX3O15254 700 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 FESP07332 822 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 EMDP50402 254 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 DUSP7Q16829 419 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 MLIPQ5VWP3 458 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 AP1ARQ63HQ0 302 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 HIPK1Q86Z02 1210 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 EPHX4Q8IUS5 362 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 TMEM151BQ8IW70 566 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 GALNT4Q8N4A0 578 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 CBR4Q8N4T8 237 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 STT3BQ8TCJ2 826 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 GPR151Q8TDV0 419 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 DAZLQ92904 295 aaKnown RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 NAF1Q96HR8 494 aaKnown RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 FBXL20Q96IG2 436 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ZNF597Q96LX8 424 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 CNPPD1Q9BV87 410 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ULBP3Q9BZM4 244 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 VN1R1Q9GZP7 353 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 OR10A5Q9H207 317 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 SLC26A1Q9H2B4 701 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 FOLH1BQ9HBA9 442 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 RAB26Q9ULW5 256 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ABCG2Q9UNQ0 655 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 LRCH1Q9Y2L9 728 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 IFT52Q9Y366 437 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 CLCA3PQ9Y6N3 262 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 SCN2AQ99250 2005 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 OR2W5A6NFC9 320 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 hCG_2039718K7EN88 272 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ADAMDEC1O15204 470 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 E2F6O75461 281 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 STX11O75558 287 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 STK17BO94768 372 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 IFNW1P05000 195 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ALPPP05187 535 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ZGLP1P0C6A0 271 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ZNF28P17035 718 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 PGDP52209 483 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 POU6F2P78424 691 aaPredicted RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 IQCCQ4KMZ1 466 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 OR14A16Q8NHC5 309 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 PTPMT1Q8WUK0 201 aaPredicted RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 NRBF2Q96F24 287 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 VSTM2LQ96N03 204 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 SDF2Q99470 211 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 PINK1Q9BXM7 581 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 PNO1Q9NRX1 252 aaKnown RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 IFT80Q9P2H3 777 aaPredicted RBP19.69■□□□□ 0.74
VPS28-212ENST00000530836 CTSFQ9UBX1 484 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 ERVK-19Q9WJR5 959 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 SH3GLB1Q9Y371 365 aa19.69■□□□□ 0.74
VPS28-212ENST00000530836 FAM32AQ9Y421 112 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms