RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 F3P13726 295 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 TCN2P20062 427 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 OAS2P29728 719 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 GARSP41250 739 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 RPL26P61254 145 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 SPOCK1Q08629 439 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 HADHQ16836 314 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 DEFB109BQ30KR1 87 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 TECRLQ5HYJ1 363 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 CCDC122Q5T0U0 273 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 HENMT1Q5T8I9 393 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 NCBP2-AS2Q69YL0 99 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 TIPARPQ7Z3E1 657 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 CEP97Q8IW35 865 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 FCAMRQ8WWV6 532 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 LYSMD1Q96S90 227 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 SLX1AQ9BQ83 275 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 NUP85Q9BW27 656 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 THAP2Q9H0W7 228 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 CARD9Q9H257 536 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF71Q9NQZ8 489 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 FBXO8Q9NRD0 319 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 RBM22Q9NW64 420 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 PKD2L2Q9NZM6 624 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 ANKMY1Q9P2S6 941 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 AMACRQ9UHK6 382 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 RPL26L1Q9UNX3 145 aaKnown RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 PCYT1BQ9Y5K3 369 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 COL6A6A6NMZ7 2263 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 RP1P56715 2156 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 RGSL1A5PLK6 1076 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 J3QR06 171 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 AP3D1O14617 1153 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 HS6ST1O60243 411 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 CIDEAO60543 219 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 BMP10O95393 424 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 MBD3O95983 291 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 HLA-DQB2P05538 268 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 LIPFP07098 398 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 CD48P09326 243 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 SELLP14151 372 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 IL4RP24394 825 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 CCNCP24863 283 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 SPINT3P49223 89 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 NR0B1P51843 470 aaKnown RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 GFERP55789 205 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 DPYSL3Q14195 570 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 IHHQ14623 411 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 PAFAH1B3Q15102 231 aaKnown RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ASTE1Q2TB18 679 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 TMEM30BQ3MIR4 351 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 LACTB2Q53H82 288 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ANKRD20A8PQ5CZ79 823 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 CCDC183Q5T5S1 534 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ATP1A1-AS1Q5TC04 95 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ALS2CLQ60I27 953 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 MZT2BQ6NZ67 158 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 PACS1Q6VY07 963 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 CFAP77Q6ZQR2 320 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF830Q96NB3 372 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 BPIFA3Q9BQP9 254 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF670Q9BS34 389 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 TBC1D10AQ9BXI6 508 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ULBP3Q9BZM4 244 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 OSGEPL1Q9H4B0 414 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 RCC2Q9P258 522 aaKnown RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF624Q9P2J8 865 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 BZW2Q9Y6E2 419 aaKnown RBP6.23□□□□□ -1.41
CSDE1-213ENST00000530784 RPS6KL1Q9Y6S9 549 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 BOD1L1Q8NFC6 3051 aa6.23□□□□□ -1.41
CSDE1-213ENST00000530784 PDZK1P1A8MUH7 402 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 GPR89AB7ZAQ6 455 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PTGES3LE9PB15 166 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 BLOC1S5-TXNDC5H3BN57 136 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 MKRN2OSH3BPM6 223 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TOX3O15405 576 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PCDH7O60245 1069 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 SLC25A14O95258 325 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 OR2C1O95371 312 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 SLC4A1P02730 911 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 C9P02748 559 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PATE4P0C8F1 98 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 GPR89BP0CG08 455 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 MSH3P20585 1137 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 DLSTP36957 453 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PSMB10P40306 273 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 CD86P42081 329 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 UBE2IP63279 158 aaKnown RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 GBE1Q04446 702 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 KLRB1Q12918 225 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PDK2Q15119 407 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 IGFBP7Q16270 282 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF876PQ49A33 203 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 ARHGAP11AQ6P4F7 1023 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TMEM26Q6ZUK4 368 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 KCTD6Q8NC69 237 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 CCNYQ8ND76 341 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms