RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MKLN1Q9UL63 735 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 EML6Q6ZMW3 1958 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 FCMRO60667 390 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ZNF354AO60765 605 aaPredicted RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 NKX2-2O95096 273 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 HPP00738 406 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 TFPTP0C1Z6 253 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 PCGF2P35227 344 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 POU6F2P78424 691 aaPredicted RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 MYBPC3Q14896 1274 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 KPNB1Q14974 876 aaKnown RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 CYP27C1Q4G0S4 372 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ATAD3BQ5T9A4 648 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 PLAG1Q6DJT9 500 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 TCTN3Q6NUS6 607 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 LSRQ86X29 649 aaPredicted RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 SPPL2CQ8IUH8 684 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ZSCAN1Q8NBB4 408 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ZNF248Q8NDW4 579 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 MIPOL1Q8TD10 442 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 BRIX1Q8TDN6 353 aaKnown RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 TMBIM1Q969X1 311 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ADIPOR1Q96A54 375 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 LCORQ96JN0 433 aaPredicted RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 BTBD9Q96Q07 612 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 SEMA4CQ9C0C4 833 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 PIGUQ9H490 435 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 Q9N2J8 555 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 A4GALTQ9NPC4 353 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 SUCOQ9UBS9 1254 aaKnown RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 ANGPTL2Q9UKU9 493 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 GPR55Q9Y2T6 319 aaPredicted RBP9.85□□□□□ -0.83
SOX6-213ENST00000530378 SNX13Q9Y5W8 968 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 ATRXP46100 2492 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 PTPRQQ9UMZ3 2332 aa9.85□□□□□ -0.83
SOX6-213ENST00000530378 CENPVL1A0A0U1RR11 272 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 SYNDIG1LA6NDD5 238 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 TMEM247A6NEH6 219 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 CFAP73A6NFT4 308 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 A6NL46 340 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 KCNK2O95069 426 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ZNF682O95780 498 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 F10P00742 488 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 BMP2P12643 396 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 GGT1P19440 569 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ITGA3P26006 1051 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ANXA11P50995 505 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 MRPS22P82650 360 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 CHRNEQ04844 493 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 PLCXD2Q0VAA5 305 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 TRIM25Q14258 630 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 GPR68Q15743 365 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 EXT1Q16394 746 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 EXOSC6Q5RKV6 272 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 B3GNTL1Q67FW5 361 aaPredicted RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 GLYATQ6IB77 296 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 DHFR2Q86XF0 187 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ZNF614Q8N883 585 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 BCORP1Q8N888 145 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 SMYD1Q8NB12 490 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 FAM110BQ8TC76 370 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ELP5Q8TE02 316 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ASB9Q96DX5 294 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ARSGQ96EG1 525 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 THOC3Q96J01 351 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 TREX2Q9BQ50 279 aaPredicted RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 BTBD2Q9BX70 525 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 TMEM38AQ9H6F2 299 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 EXD2Q9NVH0 621 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 FLRT3Q9NZU0 649 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 CBLCQ9ULV8 474 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 PPIEQ9UNP9 301 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 ANGPT4Q9Y264 503 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 GMEB1Q9Y692 573 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 TMEM200CA6NKL6 621 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 DUXAA6NLW8 204 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 OR6C76A6NM76 312 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 C1QTNF9BB2RNN3 333 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ASNA1O43681 348 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 GCM2O75603 506 aaPredicted RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 DNAJB5O75953 348 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 OR2J2O76002 312 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 SERPINA1P01009 418 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 IFI6P09912 130 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 C1QTNF9P0C862 333 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 HTR1EP28566 365 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 EIF2S3P41091 472 aaKnown RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 MAP3K8P41279 467 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 BNIP2Q12982 314 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ZNF630Q2M218 657 aaPredicted RBP9.84□□□□□ -0.83
SOX6-213ENST00000530378 DEFB109BQ30KR1 87 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 DCAF10Q5QP82 559 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 REEP3Q6NUK4 255 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ERICH5Q6P6B1 374 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 FRRS1Q6ZNA5 592 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 SPATA24Q86W54 205 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 FAM86B1Q8N7N1 296 aa9.84□□□□□ -0.83
SOX6-213ENST00000530378 ZNF441Q8N8Z8 693 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms