RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 LMAN2Q12907 356 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 BTN1A1Q13410 526 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 BEST4Q8NFU0 473 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 OR2T35Q8NGX2 323 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 POF1BQ8WVV4 589 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 GIMAP1Q8WWP7 306 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 PRRC1Q96M27 445 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 MRPL9Q9BYD2 267 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 P2RX2Q9UBL9 471 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 RASD1Q9Y272 281 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 RNF13O43567 381 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 LATS1O95835 1130 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 IFNA16P05015 189 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 NR2F1P10589 423 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ACP5P13686 325 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 OR1D2P34982 312 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ST3GAL2Q16842 350 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 GSG1Q2KHT4 349 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 SLC36A2Q495M3 483 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF322Q6U7Q0 402 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 FTMTQ8N4E7 242 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 LMNTD1Q8N9Z9 388 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 XAGE5Q8WWM1 108 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 RIT1Q92963 219 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 WDR34Q96EX3 536 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 SPRTNQ9H040 489 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 TNFRSF10DQ9UBN6 386 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 PPIEQ9UNP9 301 aaKnown RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 A0A1W2PRG6 482 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 HRO43593 1189 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 SOX30O94993 753 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ASGR1P07306 291 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 H2AFB2P0C5Z0 115 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ACSM4P0C7M7 580 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 PPP2R1BP30154 601 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 LCN1P31025 176 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 IFNGR2P38484 337 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 ELAVL2Q12926 359 aaKnown RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 TMEM44Q2T9K0 475 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 RNASE12Q5GAN4 147 aaKnown RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 FGD2Q7Z6J4 655 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 KIAA0907Q7Z7F0 614 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 GNPDA2Q8TDQ7 276 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 C12orf66Q96MD2 445 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 FBXO9Q9UK97 447 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-214ENST00000528165 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
CAPN1-214ENST00000528165 hCG_1807616A0A1W2PRN6 198 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 FAM170BA6NMN3 283 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 B4GALT2O60909 372 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 ATG13O75143 517 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 ZP3P21754 424 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 PDHA2P29803 388 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 CD70P32970 193 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-214ENST00000528165 MLLT1Q03111 559 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-214ENST00000528165 SMARCD3Q6STE5 483 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 HMGN2P46Q86SG4 172 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 SIAH3Q8IW03 269 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 VOPP1Q96AW1 172 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 TEX12Q9BXU0 123 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 CNIH4Q9P003 139 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 HCN3Q9P1Z3 774 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 RABL2AQ9UBK7 228 aaPredicted RBP13.77□□□□□ -0.2
CAPN1-214ENST00000528165 KIF25Q9UIL4 384 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 LIPT1Q9Y234 373 aa13.77□□□□□ -0.2
CAPN1-214ENST00000528165 FZD7O75084 574 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 PPM1BO75688 479 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 NFATC1O95644 943 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 IGHA1P01876 353 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 CD3GP09693 182 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 PRKACAP17612 351 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 BUD31P41223 144 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 MAPK9P45984 424 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 CCR6P51684 374 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 CTSCP53634 463 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ZSWIM7Q19AV6 140 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF740Q8NDX6 193 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SLC5A11Q8WWX8 675 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ART5Q96L15 291 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF649Q9BS31 505 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ABCG4Q9H172 646 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 KCMF1Q9P0J7 381 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 C5AR2Q9P296 337 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SESN1Q9Y6P5 492 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 CKAP5Q14008 2032 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 A0A087WUU8 490 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 TUBAL3A6NHL2 446 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 RFXAPO00287 272 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 TOR1AO14656 332 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms