RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CBR3O75828 277 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 PRF1P14222 555 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 ZNHIT3Q15649 155 aaPredicted RBP30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 LRIG3Q6UXM1 1119 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 R3HCC1LQ7Z5L2 792 aaKnown RBP30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 MCEMP1Q8IX19 187 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 WDSUB1Q8N9V3 476 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 AGR3Q8TD06 166 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 TIMP4Q99727 224 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 LMF2Q9BU23 707 aaKnown RBP30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 PRDM14Q9GZV8 571 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 BAIAP2L1Q9UHR4 511 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 ZDHHC2Q9UIJ5 367 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 WIF1Q9Y5W5 379 aa30.14■■■□□ 2.42
SSSCA1-205ENST00000527920 AHRRA9YTQ3 701 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 AKAP10O43572 662 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 KIR3DL1P43629 444 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 ATP6AP1LQ52LC2 224 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 ZNF385BQ569K4 471 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 ZNF551Q7Z340 670 aaPredicted RBP30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 OR4N2Q8NGD1 307 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 PGM2Q96G03 612 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 TREX2Q9BQ50 279 aaPredicted RBP30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 ENKD1Q9H0I2 346 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 Q9N2J8 555 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 NTMQ9P121 344 aa30.13■■■□□ 2.41
SSSCA1-205ENST00000527920 ABCA12Q86UK0 2595 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 SERPINE1P05121 402 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 DHRS4L1P0CG22 281 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 RPL3P39023 403 aaKnown RBP30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 HSPB3Q12988 150 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 CEP85LQ5SZL2 805 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 RIPPLY2Q5TAB7 128 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 ANKRD26P1Q6NSI1 321 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 PLCZ1Q86YW0 608 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 CCDC71Q8IV32 467 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 FAM83FQ8NEG4 500 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 CLHC1Q8NHS4 586 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 HOXB13Q92826 284 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 CIDECQ96AQ7 238 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 OR2B2Q9GZK3 357 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 SERHLQ9NQF3 203 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 SH3BP4Q9P0V3 963 aa30.12■■■□□ 2.41
SSSCA1-205ENST00000527920 SNUPNO95149 360 aaKnown RBP30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 HPCAL1P37235 193 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 TOMM20Q15388 145 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 SF3B4Q15427 424 aaKnown RBP eCLIP30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 DECR1Q16698 335 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 EIPR1Q53HC9 387 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 OR10Q1Q8NGQ4 319 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 PPP1R14CQ8TAE6 165 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 EFHD2Q96C19 240 aaPredicted RBP30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 ZIM3Q96PE6 472 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 KCNJ16Q9NPI9 418 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 ALKBH4Q9NXW9 302 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 ATP6V1HQ9UI12 483 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 MRTO4Q9UKD2 239 aaKnown RBP30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 CBLCQ9ULV8 474 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 ABCG2Q9UNQ0 655 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 MAPRE3Q9UPY8 281 aa30.11■■■□□ 2.41
SSSCA1-205ENST00000527920 PEX11AO75192 247 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 TOXO94900 526 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 ACTL6AO96019 429 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 GCKP35557 465 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 ZFP36L2P47974 494 aaKnown RBP30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 GAS1P54826 345 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 MANFP55145 182 aaKnown RBP30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 TFF3Q07654 80 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 WIPI1Q5MNZ9 446 aaPredicted RBP30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 C6orf136Q5SQH8 315 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 GDF7Q7Z4P5 450 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 CEP70Q8NHQ1 597 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 PKNOX2Q96KN3 472 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 C3orf30Q96M34 536 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 C3orf14Q9HBI5 128 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 SLC6A5Q9Y345 797 aa30.1■■■□□ 2.41
SSSCA1-205ENST00000527920 C2orf72A6NCS6 295 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 LYPLA1O75608 230 aaPredicted RBP30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 ZWINTO95229 277 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 PRPS2P11908 318 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 CYP4B1P13584 511 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 BMP7P18075 431 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 GPC1P35052 558 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 PSMD4P55036 377 aaKnown RBP30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 GAB1Q13480 694 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 MLC1Q15049 377 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 ACSF3Q4G176 576 aaPredicted RBP30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 UGT2B28Q9BY64 529 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 TRIM8Q9BZR9 551 aa30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 MRPS18CQ9Y3D5 142 aaKnown RBP30.09■■■□□ 2.41
SSSCA1-205ENST00000527920 A0A0G2JNJ9 132 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 SCAMP2O15127 329 aaKnown RBP30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 HSPA4LO95757 839 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 IL33O95760 270 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 EPPINO95925 133 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 IGFBP2P18065 325 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 SRD5A2P31213 254 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 EVI2BP34910 448 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 ADH7P40394 386 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 MAP3K8P41279 467 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms