RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MMACHCQ9Y4U1 282 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 HES2Q9Y543 173 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 BAZ2BQ9UIF8 2168 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 LY75O60449 1722 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 LNP1A1A4G5 178 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ELOVL7A1L3X0 281 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ASPDHA6ND91 283 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 FAM220BPB1ANY3 271 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PRR23D1E9PI22 279 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 GTPBP1O00178 669 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 CXCR6O00574 342 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CASKO14936 926 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 DLEU1O43261 78 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 BPNT1O95861 308 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 C6orf47O95873 294 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 AK1P00568 194 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 TFP02787 698 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 OPN1MWP04001 364 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 TCRBP04435 133 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CTSBP07858 339 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 OR8U8P0C7N1 319 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SLC35E2BP0CK96 405 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 RD3LP0DJH9 198 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PRR23D2P0DMB1 279 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 OPN1MW2P0DN77 364 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 OPN1MW3P0DN78 364 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 S1PR1P21453 382 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CNR1P21554 472 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PPP2R1BP30154 601 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GDI1P31150 447 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GKP32189 559 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CSF2RBP32927 897 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 BMI1P35226 326 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MNDAP41218 407 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CRYBB2P43320 205 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CDK8P49336 464 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SUOXP51687 545 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 HCCSP53701 268 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SESN2P58004 480 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 RAB10P61026 200 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SEC61A1P61619 476 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 RPS26P62854 115 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 TAP2Q03519 686 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 LMAN2Q12907 356 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MLLT11Q13015 90 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 C1DQ13901 141 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 GRB14Q14449 540 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 NKG7Q16617 165 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MSMPQ1L6U9 139 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GSG1Q2KHT4 349 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GXYLT1Q4G148 440 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 AKIRIN2Q53H80 203 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PAGE3Q5JUK9 113 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MANEAQ5SRI9 462 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 FAM69AQ5T7M9 428 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MEDAGQ5VYS4 303 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ZNF660Q6AZW8 331 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 PLAG1Q6DJT9 500 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PAPD4Q6PIY7 484 aaKnown RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 SCIMPQ6UWF3 145 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 C15orf39Q6ZRI6 1047 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MOB3CQ70IA8 216 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 KDELC2Q7Z4H8 507 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ZAR1Q86SH2 424 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 TMEM135Q86UB9 458 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 LRRTM4Q86VH4 590 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ANGPTL5Q86XS5 388 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ZDHHC21Q8IVQ6 265 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CEP97Q8IW35 865 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GPR26Q8NDV2 337 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ADPRHL1Q8NDY3 354 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ZNF548Q8NEK5 533 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 OR4Q3Q8NH05 313 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CYP2W1Q8TAV3 490 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ACOT11Q8WXI4 607 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 ACOT12Q8WYK0 555 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 COA7Q96BR5 231 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MALSU1Q96EH3 234 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PHYHIPLQ96FC7 376 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 CDKN2AIPNLQ96HQ2 116 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PYURFQ96I23 114 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 FAM84BQ96KN1 310 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 KCTD7Q96MP8 289 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SPATA13Q96N96 652 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GPR78Q96P69 363 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MS4A4EQ96PG1 132 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 FAM193BQ96PV7 902 aaPredicted RBP5.48□□□□□ -1.53
CD44-225ENST00000527326 NDUFAF3Q9BU61 184 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 IFT27Q9BW83 186 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 TEX101Q9BY14 249 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 SEC11CQ9BY50 192 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 ABCG5Q9H222 651 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 MTG2Q9H4K7 406 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 PRDM13Q9H4Q3 707 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GSTO2Q9H4Y5 243 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 GREM2Q9H772 168 aa5.48□□□□□ -1.53
CD44-225ENST00000527326 METTL17Q9H7H0 456 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms