RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 SDF2Q99470 211 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 LPAR4Q99677 370 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 TREX2Q9BQ50 279 aaPredicted RBP13.34□□□□□ -0.27
COLCA2-202ENST00000526216 BTBD2Q9BX70 525 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 WWTR1Q9GZV5 400 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 NXF5Q9H1B4 397 aaKnown RBP13.34□□□□□ -0.27
COLCA2-202ENST00000526216 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 IL17BQ9UHF5 180 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 PADI2Q9Y2J8 665 aa13.34□□□□□ -0.27
COLCA2-202ENST00000526216 GPC6Q9Y625 555 aaPredicted RBP13.34□□□□□ -0.27
COLCA2-202ENST00000526216 PRAMEF25A6NGN4 478 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 TMEM200CA6NKL6 621 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 C5orf58C9J3I9 102 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 KCNK2O95069 426 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 STAMBPO95630 424 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 AGR2O95994 175 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 IGHEP01854 428 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 CD63P08962 238 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 SPINK2P20155 84 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 OTX2P32243 289 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 PPICP45877 212 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 CRISP3P54108 245 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 RCN1Q15293 331 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 ATAD3BQ5T9A4 648 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 INTS11Q5TA45 600 aaKnown RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 PRAMEF8Q5VWM4 474 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 PRAMEF7Q5VXH5 474 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 AAGABQ6PD74 315 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 C16orf62Q7Z3J2 963 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 GOLM1Q8NBJ4 401 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 PAPD5Q8NDF8 572 aaKnown RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 GPR32P1Q8NGA4 272 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 ZG16BQ96DA0 208 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 RMND5BQ96G75 393 aaPredicted RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 ZNF350Q9GZX5 532 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 QRSL1Q9H0R6 528 aaKnown RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 CCM2LQ9NUG4 571 aaPredicted RBP13.33□□□□□ -0.28
COLCA2-202ENST00000526216 KCNE5Q9UJ90 142 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 LIPT1Q9Y234 373 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 PCDHGA6Q9Y5G7 932 aa13.33□□□□□ -0.28
COLCA2-202ENST00000526216 NPIPA5A0A0B4J1W7 369 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 A0A0G2JPF8 293 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 OR6C76A6NM76 312 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 HNRNPCL2B2RXH8 293 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 HNRNPCL3B7ZW38 293 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 NPIPA7E9PJI5 369 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 TPST1O60507 370 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ZNF354AO60765 605 aaPredicted RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 FKBP6O75344 327 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 GMNNO75496 209 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 MFN2O95140 757 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ZNF682O95780 498 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 EPPINO95925 133 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 GPIP06744 558 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 NPIPA8P0DM63 369 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 HNRNPCL4P0DMR1 293 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 SLC7A1P30825 629 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 RNF4P78317 190 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 FOXC1Q12948 553 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 C16orf47Q6ZP98 133 aaPredicted RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 EID3Q8N140 333 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 LILRA2Q8N149 483 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ADAMTS17Q8TE56 1095 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 VMP1Q96GC9 406 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 LCORQ96JN0 433 aaPredicted RBP13.32□□□□□ -0.28
COLCA2-202ENST00000526216 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 COL21A1Q96P44 957 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 SEPHS2Q99611 448 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 GPR87Q9BY21 358 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 SAP130Q9H0E3 1048 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ANAPC2Q9UJX6 822 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 CHST2Q9Y4C5 530 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 ZNF451Q9Y4E5 1061 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 SPTBN4Q9H254 2564 aa13.32□□□□□ -0.28
COLCA2-202ENST00000526216 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 C2orf92A0A1B0GVN3 265 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 TRABD2BA6NFA1 517 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 FRG2CA6NGY1 282 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 PCDH17O14917 1159 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 KIAA0513O60268 411 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 NADKO95544 446 aaPredicted RBP13.31□□□□□ -0.28
COLCA2-202ENST00000526216 MT-ND1P03886 318 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 LIPCP11150 499 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 UMPSP11172 480 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 TNFRSF1BP20333 461 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 DRD5P21918 477 aa13.31□□□□□ -0.28
COLCA2-202ENST00000526216 RPS4Y1P22090 263 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms