RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ICKQ9UPZ9 632 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 hCG_1807616A0A1W2PRN6 198 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 EME2A4GXA9 379 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 OR6C68A6NDL8 312 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 G3V2L1 256 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 HSPB6O14558 160 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 BIRC5O15392 142 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 TAPBPO15533 448 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 FLRT2O43155 660 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 B4GAT1O43505 415 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NUDT21O43809 227 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 KLK8O60259 260 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 STK16O75716 305 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SUPT7LO94864 414 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SLC16A8O95907 504 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 BPGMP07738 259 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CD59P13987 128 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CKMT2P17540 419 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NR1D1P20393 614 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 IL11P20809 199 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ALDH4A1P30038 563 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ALDH3A1P30838 453 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SHMT2P34897 504 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 GGT5P36269 586 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CDKN2AP42771 156 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 BDKRB1P46663 353 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 MTNR1AP48039 350 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ENTPD1P49961 510 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 RAB28P51157 221 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NAGLUP54802 743 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 OR1D5P58170 312 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 DNAJB13P59910 316 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 PRKAA1Q13131 559 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NAE1Q13564 534 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 TSTA3Q13630 321 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 GPR18Q14330 331 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 GRB7Q14451 532 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 IL13RA2Q14627 380 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 PPP1R3AQ16821 1122 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 AP5B1Q2VPB7 878 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CFAP157Q5JU67 520 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 STPG1Q5TH74 334 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 DCAF12L2Q5VW00 463 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 HEPHL1Q6MZM0 1159 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CAPN13Q6MZZ7 669 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 METTL2BQ6P1Q9 378 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 KLHL35Q6PF15 583 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ZYG11AQ6WRX3 759 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 Q6ZTK2 550 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ASCL5Q7RTU5 278 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 C10orf107Q8IVU9 208 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SLC35F3Q8IY50 421 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 HORMAD2Q8N7B1 307 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CCNYL1Q8N7R7 359 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 Q8N9G6 341 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 PPFIBP2Q8ND30 876 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 Q8NFD4 153 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 OR52E1Q8NGJ3 308 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 OR2L8Q8NGY9 312 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 DYDC1Q8WWB3 177 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ST8SIA4Q92187 359 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SMPDL3AQ92484 453 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NAT6Q93015 286 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ESAMQ96AP7 390 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SLC22A18Q96BI1 424 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 RHBDF1Q96CC6 855 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 FBXL8Q96CD0 374 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 PHF21BQ96EK2 531 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 MED8Q96G25 268 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 RBM18Q96H35 190 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CNDP2Q96KP4 475 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 COG8Q96MW5 612 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 IL17FQ96PD4 163 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 HGH1Q9BTY7 390 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 NPLQ9BXD5 320 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 RAB11FIP5Q9BXF6 653 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 TBC1D10AQ9BXI6 508 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CAPS2Q9BXY5 557 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 POLDIP3Q9BY77 421 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 CTDSP1Q9GZU7 261 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 PCBD2Q9H0N5 130 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ATG10Q9H0Y0 220 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 XKR8Q9H6D3 395 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 UCK1Q9HA47 277 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 CCDC177Q9NQR7 707 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 TMEM160Q9NX00 188 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 WWOXQ9NZC7 414 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 OR6C2Q9NZP2 312 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SPATA7Q9P0W8 599 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 STOX2Q9P2F5 926 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 COPG2Q9UBF2 871 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 RABL2AQ9UBK7 228 aaPredicted RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 CIDEBQ9UHD4 219 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 PTBP2Q9UKA9 531 aaKnown RBP4.21□□□□□ -1.74
USP48-211ENST00000526044 PLAGL1Q9UM63 463 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 SLC22A14Q9Y267 594 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ANGPTL3Q9Y5C1 460 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms