RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GABRA3P34903 492 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 KRT20P35900 424 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 CHI3L1P36222 383 aaPredicted RBP19.1■□□□□ 0.65
CD44-222ENST00000526025 ANXA11P50995 505 aaKnown RBP19.1■□□□□ 0.65
CD44-222ENST00000526025 DUSP5Q16690 384 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 GKAP1Q5VSY0 366 aaPredicted RBP19.1■□□□□ 0.65
CD44-222ENST00000526025 MTDHQ86UE4 582 aaKnown RBP19.1■□□□□ 0.65
CD44-222ENST00000526025 FBXW8Q8N3Y1 598 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 Q8NA96 180 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 PSD4Q8NDX1 1056 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 GPR151Q8TDV0 419 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 ADAMTS15Q8TE58 950 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 ZFP90Q8TF47 636 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 SLC9A6Q92581 669 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 TMBIM1Q969X1 311 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 BTBD2Q9BX70 525 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 MFRPQ9BY79 579 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 MAP10Q9P2G4 905 aa19.1■□□□□ 0.65
CD44-222ENST00000526025 CHCHD2Q9Y6H1 151 aaPredicted RBP19.1■□□□□ 0.65
CD44-222ENST00000526025 ANKRD33BA6NCL7 494 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 IL33O95760 270 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 AK1P00568 194 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 MATN1P21941 496 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 NFATC3Q12968 1075 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 PAGE3Q5JUK9 113 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 TBCELQ5QJ74 424 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 SLC22A10Q63ZE4 541 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 MDGA2Q7Z553 956 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 BCORP1Q8N888 145 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 COX18Q8N8Q8 333 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 OR10G3Q8NGC4 313 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 FAM110BQ8TC76 370 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 SPPL2AQ8TCT8 520 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 JADE3Q92613 823 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 DIO2Q92813 273 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 HGDQ93099 445 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 COL21A1Q96P44 957 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 CCDC106Q9BWC9 280 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 SERHL2Q9H4I8 314 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 SLC6A13Q9NSD5 602 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 SACM1LQ9NTJ5 587 aa19.09■□□□□ 0.65
CD44-222ENST00000526025 TRBV5-3A0A0A0MS03 114 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 DCTN3O75935 186 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 GSNP06396 782 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 GUSBP08236 651 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 CD1EP15812 388 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 PPIBP23284 216 aaKnown RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 IL12BP29460 328 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 KHKP50053 298 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 FBXW4P57775 412 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.08■□□□□ 0.64
CD44-222ENST00000526025 DNAJC14Q6Y2X3 702 aaPredicted RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 WDR53Q7Z5U6 358 aaPredicted RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 PTRH1Q86Y79 214 aaKnown RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 PRR22Q8IZ63 422 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 CLEC4FQ8N1N0 589 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 FAM98AQ8NCA5 519 aaKnown RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 FAM13CQ8NE31 585 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 OR4N2Q8NGD1 307 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 RNF138Q8WVD3 245 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 OR7D2Q96RA2 312 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 G6PC3Q9BUM1 346 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 RAD21L1Q9H4I0 556 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 TPT1P8Q9HAU6 139 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 CNOT11Q9UKZ1 510 aaKnown RBP19.08■□□□□ 0.64
CD44-222ENST00000526025 PCDHB14Q9Y5E9 798 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 CFAP46Q8IYW2 2715 aa19.08■□□□□ 0.64
CD44-222ENST00000526025 NINQ8N4C6 2090 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 KLRC4-KLRK1H3BQV0 150 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 UGT2B11O75310 529 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 REM1O75628 298 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 KCNK2O95069 426 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 NPPAP01160 153 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 P04436 131 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 ST13P50502 369 aaKnown RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 POU6F2P78424 691 aaPredicted RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 STX5Q13190 355 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 SNTA1Q13424 505 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 DLEU7Q6UYE1 221 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 MTERF4Q7Z6M4 381 aaKnown RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 RETREG3Q86VR2 466 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 POGLUT1Q8NBL1 392 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 RP9Q8TA86 221 aaKnown RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 PIK3R3Q92569 461 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 NTNG2Q96CW9 530 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 TMCO6Q96DC7 493 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 RMND5BQ96G75 393 aaPredicted RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 YIPF4Q9BSR8 244 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 OR51I1Q9H343 314 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 THUMPD1Q9NXG2 353 aaKnown RBP19.07■□□□□ 0.64
CD44-222ENST00000526025 ARMCX1Q9P291 453 aa19.07■□□□□ 0.64
CD44-222ENST00000526025 SMG1Q96Q15 3661 aaKnown RBP19.06■□□□□ 0.64
CD44-222ENST00000526025 GXYLT2A0PJZ3 443 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 NGFRP08138 427 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CCL3P10147 92 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CNR1P21554 472 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 MVDP53602 400 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 RPS26P62854 115 aaKnown RBP19.06■□□□□ 0.64
CD44-222ENST00000526025 FADDQ13158 208 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CYLC2Q14093 348 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms