RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 TAC1P20366 129 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 CASP2P42575 452 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 PCYT1AP49585 367 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 GFRA1P56159 465 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 SIRPAP78324 504 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 EEF1A1P5Q5VTE0 462 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 ANKRD34AQ69YU3 496 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 SCIMPQ6UWF3 145 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 ZYG11AQ6WRX3 759 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 LAS2Q8IYD9 372 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 TLCD1Q96CP7 247 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 PHF21BQ96EK2 531 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 CMTM7Q96FZ5 175 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 NXF5Q9H1B4 397 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 CXorf21Q9HAI6 301 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 OPTCQ9UBM4 332 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 HEY2Q9UBP5 337 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 DTX4Q9Y2E6 619 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 A0A1W2PR48 441 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 LRRC14BA6NHZ5 514 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 C16orf97H3BN30 126 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 TMPRSS11DO60235 418 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 PPM1BO75688 479 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 SIX3O95343 332 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 PLAUP00749 431 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 TP53P04637 393 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 RPS17P08708 135 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 NR2F6P10588 404 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 ZNF708P17019 499 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 GALNSP34059 522 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 ETV4P43268 484 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 KCNJ5P48544 419 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 PRKAA2P54646 552 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 CLDN18P56856 261 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 FUT7Q11130 342 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 TBCCQ15814 346 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 GALNT12Q8IXK2 581 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 ZNF615Q8N8J6 731 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 WDSUB1Q8N9V3 476 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 OR7G3Q8NG95 312 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 TCP10LQ8TDR4 215 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 HGDQ93099 445 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 RGMAQ96B86 450 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 KLRF1Q9NZS2 232 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 MID2Q9UJV3 735 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 PCTPQ9UKL6 214 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 EXO1Q9UQ84 846 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
CCDC90B-205ENST00000525916 GOLGA6L10A6NI86 522 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 TLX2O43763 284 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 CD5LO43866 347 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 SPAG7O75391 227 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 EEDO75530 441 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 CBR3O75828 277 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 SASH3O75995 380 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 AIFM1O95831 613 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 CRHP06850 196 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 THBDP07204 575 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 SLC35E2P0CK97 266 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 CPA3P15088 417 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 EPB42P16452 691 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 IMPDH1P20839 514 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 GPX3P22352 226 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 KIR2DL2P43627 348 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 PIK3CGP48736 1102 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 DNAJB13P59910 316 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 GTF2H2Q13888 395 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 ZNF678Q5SXM1 525 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 MRM1Q6IN84 353 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 GTF2H2CQ6P1K8 395 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 TMEM81Q6P7N7 255 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 GOLGA7Q7Z5G4 137 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 TEX9Q8N6V9 391 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 HUS1BQ8NHY5 278 aa11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 ZNF483Q8TF39 744 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 ZNF845Q96IR2 970 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-205ENST00000525916 SFXN2Q96NB2 322 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms