RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 UBQLN3Q9H347 655 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 RUBCNLQ9H714 662 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 C3orf14Q9HBI5 128 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 Q9N2J8 555 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 EIF3LQ9Y262 564 aaKnown RBP16.02■□□□□ 0.16
NR1H3-228ENST00000525441 RAP2CQ9Y3L5 183 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 PCDHGB3Q9Y5G1 929 aa16.02■□□□□ 0.16
NR1H3-228ENST00000525441 C15orf38-AP3S2A0A0A6YYH1 394 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 SCAMP2O15127 329 aaKnown RBP16.01■□□□□ 0.15
NR1H3-228ENST00000525441 HNRNPRO43390 633 aaKnown RBP16.01■□□□□ 0.15
NR1H3-228ENST00000525441 ITM2AO43736 263 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 GABRA1P14867 456 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 PTPN6P29350 595 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 GCKP35557 465 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-228ENST00000525441 SLC1A6P48664 564 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 PSG6Q00889 435 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 DECR1Q16698 335 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 ZNF385BQ569K4 471 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 IL23RQ5VWK5 629 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 DESI1Q6ICB0 168 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 CA5BP1Q8WTZ4 195 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 ZBTB9Q96C00 473 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 PRPF18Q99633 342 aaKnown RBP16.01■□□□□ 0.15
NR1H3-228ENST00000525441 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
NR1H3-228ENST00000525441 C1orf50Q9BV19 199 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 GALNT9Q9HCQ5 603 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 ATAD3AQ9NVI7 634 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 TNFRSF10DQ9UBN6 386 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 GIMAP2Q9UG22 337 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 ATP6V1HQ9UI12 483 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 CBLCQ9ULV8 474 aa16.01■□□□□ 0.15
NR1H3-228ENST00000525441 CBR3O75828 277 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 ENDOUP21128 410 aaKnown RBP16■□□□□ 0.15
NR1H3-228ENST00000525441 BGNP21810 368 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 PTGER4P35408 488 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 PTGDSP41222 190 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 RPL14P50914 215 aaKnown RBP16■□□□□ 0.15
NR1H3-228ENST00000525441 PSMD4P55036 377 aaKnown RBP16■□□□□ 0.15
NR1H3-228ENST00000525441 PMPCAQ10713 525 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 STX3Q13277 289 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 MPP2Q14168 576 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 SMU1Q2TAY7 513 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 VPS26BQ4G0F5 336 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 B3GNT6Q6ZMB0 384 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 MARVELD2Q8N4S9 558 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 NATD1Q8N6N6 113 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 ZNF781Q8N8C0 355 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 OR4N2Q8NGD1 307 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
NR1H3-228ENST00000525441 LMF2Q9BU23 707 aaKnown RBP16■□□□□ 0.15
NR1H3-228ENST00000525441 ALKBH4Q9NXW9 302 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 WIF1Q9Y5W5 379 aa16■□□□□ 0.15
NR1H3-228ENST00000525441 FAM47E-STBD1D6RA91 191 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 DYNC1I1O14576 645 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 PRPS1L1P21108 318 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CHRNB4P30926 498 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 NUP107P57740 925 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 EMX2Q04743 252 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 GAB1Q13480 694 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CASP8Q14790 479 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 MLC1Q15049 377 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 SF3B4Q15427 424 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■■■■□ 23.2
NR1H3-228ENST00000525441 PDCD2Q16342 344 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-228ENST00000525441 C1orf185Q5T7R7 199 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CPTPQ5TA50 214 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CES4AQ5XG92 561 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 SZRD1Q7Z422 152 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 PLCZ1Q86YW0 608 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CDRT4Q8N9R6 151 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 MS4A4EQ96PG1 132 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 EQTNQ9NQ60 294 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 SERHLQ9NQF3 203 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 NOP53Q9NZM5 478 aaKnown RBP15.99■□□□□ 0.15
NR1H3-228ENST00000525441 MAPRE3Q9UPY8 281 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 CENPEQ02224 2701 aa15.99■□□□□ 0.15
NR1H3-228ENST00000525441 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 C2orf72A6NCS6 295 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 EMC8O43402 210 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 KCNH1O95259 989 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 IL33O95760 270 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 CYP4B1P13584 511 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 GRNP28799 593 aaKnown RBP15.98■□□□□ 0.15
NR1H3-228ENST00000525441 GABRA3P34903 492 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 CLK3P49761 638 aaKnown RBP15.98■□□□□ 0.15
NR1H3-228ENST00000525441 PRKAG1P54619 331 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 PRR5P85299 388 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 PTGR1Q14914 329 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 HDXQ7Z353 690 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 PM20D2Q8IYS1 436 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 RPRMLQ8N4K4 120 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 FAM83FQ8NEG4 500 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-228ENST00000525441 NUP43Q8NFH3 380 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 OR7A2PQ8NGA2 310 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 OR10Q1Q8NGQ4 319 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 RNF138Q8WVD3 245 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 MARVELD3Q96A59 401 aa15.98■□□□□ 0.15
NR1H3-228ENST00000525441 TTYH2Q9BSA4 534 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms