RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 AGR3Q8TD06 166 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 CAVIN3Q969G5 261 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 C14orf79Q96F83 325 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 TSSK3Q96PN8 268 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 TUBB1Q9H4B7 451 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 DNAJC15Q9Y5T4 150 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 WIF1Q9Y5W5 379 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 KIAA1549Q9HCM3 1950 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 PCNX3Q9H6A9 2034 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 NUP214P35658 2090 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-203ENST00000525013 HSPB2A8KAH6 182 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 NPIPB8E9PQR5 432 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 UPK1AO00322 258 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 PLOD2O00469 737 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 PDPK1O15530 556 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 EPPINO95925 133 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 IGFBP2P18065 325 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 GPC1P35052 558 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 HSPB3Q12988 150 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 HSPB2Q16082 182 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 RFTN2Q52LD8 501 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-203ENST00000525013 NHSL2Q5HYW2 709 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 DCST1Q5T197 706 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 OR5M10Q6IEU7 315 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 ZCCHC23Q6ZST2 131 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 SEM1Q6ZVN7 128 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 ZNF551Q7Z340 670 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-203ENST00000525013 PLCZ1Q86YW0 608 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 CLHC1Q8NHS4 586 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 TWIST2Q8WVJ9 160 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 CIDECQ96AQ7 238 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-203ENST00000525013 PPCDCQ96CD2 204 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 ELP4Q96EB1 424 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 CCT7Q99832 543 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 TREX2Q9BQ50 279 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-203ENST00000525013 PRDM14Q9GZV8 571 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 SH3BP4Q9P0V3 963 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 BAIAP2L1Q9UHR4 511 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 MPDZO75970 2070 aa16.9■□□□□ 0.3
CAPN1-203ENST00000525013 ANKHD1Q8IWZ3 2542 aaKnown RBP16.89■□□□□ 0.29
CAPN1-203ENST00000525013 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-203ENST00000525013 ACTL6AO96019 429 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 FGF4P08620 206 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 CYP4B1P13584 511 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 CREB1P16220 341 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 SDC1P18827 310 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 TCEA1P23193 301 aaKnown RBP16.89■□□□□ 0.29
CAPN1-203ENST00000525013 PSG6Q00889 435 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 ZNHIT3Q15649 155 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-203ENST00000525013 DECR1Q16698 335 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 SLC25A35Q3KQZ1 300 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 CYP27C1Q4G0S4 372 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 RNF165Q6ZSG1 346 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 LACC1Q8IV20 430 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 HOMEZQ8IX15 550 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 DMRTC2Q8IXT2 367 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-203ENST00000525013 OR2L13Q8N349 312 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 WDYHV1Q96HA8 205 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 TRIB1Q96RU8 372 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 OR2B2Q9GZK3 357 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 REEP4Q9H6H4 257 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 Q9N2J8 555 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 TAS2R10Q9NYW0 307 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 DKKL1Q9UK85 242 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 CSMD1Q96PZ7 3565 aa16.89■□□□□ 0.29
CAPN1-203ENST00000525013 DVL2O14641 736 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 PIP5K1BO14986 540 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 LSM1O15116 133 aaKnown RBP16.88■□□□□ 0.29
CAPN1-203ENST00000525013 SCO2O43819 266 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 IL2RAP01589 272 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 BMP5P22003 454 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 GRK2P25098 689 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 RFX3P48380 749 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 KRTAP10-9P60411 292 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 GAB1Q13480 694 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 KRT71Q3SY84 523 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 IFNEQ86WN2 208 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 TRIM42Q8IWZ5 723 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 ZFP28Q8NHY6 868 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 FCRL1Q96LA6 429 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 MCCC2Q9HCC0 563 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 EQTNQ9NQ60 294 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 FBXL2Q9UKC9 423 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 MRTO4Q9UKD2 239 aaKnown RBP16.88■□□□□ 0.29
CAPN1-203ENST00000525013 CBLCQ9ULV8 474 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 TMED5Q9Y3A6 229 aa16.88■□□□□ 0.29
CAPN1-203ENST00000525013 OTOGQ6ZRI0 2925 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 MED12LQ86YW9 2145 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 CEACAM8P31997 349 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-203ENST00000525013 GABRA3P34903 492 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 EVI2BP34910 448 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 TIMP3P35625 211 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 ASMTP46597 345 aa16.87■□□□□ 0.29
CAPN1-203ENST00000525013 PRKAG1P54619 331 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms