RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CXCR6O00574 342 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ACOX3O15254 700 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ITGAMP11215 1152 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 GGT1P19440 569 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 RFX3P48380 749 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CRISP3P54108 245 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 NRG3P56975 720 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 MRPS22P82650 360 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 Q0VFX4 171 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 FUT5Q11128 374 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 AIMP2Q13155 320 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 VEZF1Q14119 521 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 TRIM25Q14258 630 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 DECR1Q16698 335 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ARHGAP11BQ3KRB8 267 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CYP27C1Q4G0S4 372 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CCNJQ5T5M9 372 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 INTS11Q5TA45 600 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 REEP3Q6NUK4 255 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 FIGNL1Q6PIW4 674 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 PTRH1Q86Y79 214 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 TAGAPQ8N103 731 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ANKFN1Q8N957 763 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CHDHQ8NE62 594 aaPredicted RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 OR4N2Q8NGD1 307 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 FIG4Q92562 907 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 TP53INP1Q96A56 240 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 HSPBAP1Q96EW2 488 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 TRNT1Q96Q11 434 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 MUC13Q9H3R2 512 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 LIN28AQ9H9Z2 209 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ATP13A2Q9NQ11 1180 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CALML5Q9NZT1 146 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 MRTO4Q9UKD2 239 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 POLHQ9Y253 713 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 ZNF451Q9Y4E5 1061 aa14.65□□□□□ -0.06
TSPAN4-213ENST00000524895 CACNA1AO00555 2505 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 PRAMEF27A3QJZ7 478 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 A8MUI8 341 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 WWP2O00308 870 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 ARPC2O15144 300 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 TO15178 435 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 KCNK2O95069 426 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 H6PDO95479 791 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 NCK1P16333 377 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 ATP6V1C1P21283 382 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 AQP1P29972 269 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 KRT20P35900 424 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 PIGAP37287 484 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 EIF2S3P41091 472 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 PLCXD2Q0VAA5 305 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 CHAF1BQ13112 559 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 FXNQ16595 210 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 RPS26P11Q5JNZ5 115 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 C1orf146Q5VVC0 180 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 IRAK1BP1Q5VVH5 260 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 TCTN3Q6NUS6 607 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 JMJD6Q6NYC1 403 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 SPACA3Q8IXA5 215 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC34A3Q8N130 599 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC5A8Q8N695 610 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 BCORP1Q8N888 145 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 TMEM102Q8N9M5 508 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 BBS10Q8TAM1 723 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC22A8Q8TCC7 542 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 FAM162AQ96A26 154 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 THOC3Q96J01 351 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 G6PC3Q9BUM1 346 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 MYOTQ9UBF9 498 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 POMPQ9Y244 141 aa14.64□□□□□ -0.07
TSPAN4-213ENST00000524895 MED19A0JLT2 244 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 TMEM200CA6NKL6 621 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 EFSO43281 561 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 STX11O75558 287 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 CHRM4P08173 479 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 ITGA3P26006 1051 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 IL12BP29460 328 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 PSMD4P55036 377 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 POLE2P56282 527 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 TRAP1Q12931 704 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 FLOT2Q14254 428 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 MAPK11Q15759 364 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 LRRC23Q53EV4 343 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 BROXQ5VW32 411 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 PRAMEF8Q5VWM4 474 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 PRAMEF7Q5VXH5 474 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 GLYATQ6IB77 296 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 CCDC81Q6ZN84 652 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 C16orf47Q6ZP98 133 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 LRRC74BQ6ZQY2 392 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 OLIG3Q7RTU3 272 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 DHFR2Q86XF0 187 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 PROSER1Q86XN7 944 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 PRR22Q8IZ63 422 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 BRIX1Q8TDN6 353 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 TMBIM1Q969X1 311 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 LRGUKQ96M69 825 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 LMF1Q96S06 567 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms