RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 VASNQ6EMK4 673 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 SZRD1Q7Z422 152 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 COMTD1Q86VU5 262 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 GRAMD2AQ8IUY3 354 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 CMTM8Q8IZV2 173 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 OR8D4Q8NGM9 314 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 C1QTNF7Q9BXJ2 289 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 PINK1Q9BXM7 581 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZCCHC2Q9C0B9 1178 aaKnown RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 SERHL2Q9H4I8 314 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ANKRD19PQ9H560 264 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 MARK1Q9P0L2 795 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TRPC4Q9UBN4 977 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ITM2BQ9Y287 266 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TRAV6A0A075B6T7 132 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TEX13CA0A0J9YWL9 993 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 SURF4O15260 269 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 EEF1E1O43324 174 aaKnown RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 RNF13O43567 381 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 LANCL1O43813 399 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 FGBP02675 491 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TCRBP04435 133 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ACP5P13686 325 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 HOXD10P28358 340 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 CTGFP29279 349 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 BUD31P41223 144 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 MFSD13AQ14CX5 517 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TRAM2Q15035 370 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF658BQ4V348 819 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 KIAA1161Q6NSJ0 714 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 LCTLQ6UWM7 567 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 FGD2Q7Z6J4 655 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 KLBQ86Z14 1044 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 CFAP206Q8IYR0 622 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF366Q8N895 744 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 SAMD12Q8N8I0 201 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 PIGXQ8TBF5 258 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 EXOSC8Q96B26 276 aaKnown RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZSWIM3Q96MP5 696 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF649Q9BS31 505 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 RHBGQ9H310 441 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF334Q9HCZ1 680 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 SLCO1C1Q9NYB5 712 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 H2AFY2Q9P0M6 372 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 TNFRSF10DQ9UBN6 386 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 PRKAG2Q9UGJ0 569 aa9.64□□□□□ -0.87
SPIDR-225ENST00000524141 ZFR2Q9UPR6 939 aaKnown RBP9.64□□□□□ -0.87
SPIDR-225ENST00000524141 PRAMEF27A3QJZ7 478 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 CTRB1P17538 263 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 CD53P19397 219 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 XPAP23025 273 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 BSGP35613 385 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 MMP12P39900 470 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 STAT5AP42229 794 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF81P51508 661 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SLC7A9P82251 487 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 LSM11P83369 360 aaKnown RBP eCLIP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 BAMBIQ13145 260 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 RPA4Q13156 261 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 FGFBP1Q14512 234 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 INSL4Q14641 139 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 TRAM1Q15629 374 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 CLEC12AQ5QGZ9 265 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 CTRB2Q6GPI1 263 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SMARCD3Q6STE5 483 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 TECPR1Q7Z6L1 1165 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 FAM129CQ86XR2 697 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 OR2A12Q8NGT7 310 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 OR8K5Q8NH50 307 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 ADAMTS14Q8WXS8 1223 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 MRPS31Q92665 395 aaKnown RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 NXPE2Q96DL1 559 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 MSANTD3Q96H12 275 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 MRPL17Q9NRX2 175 aaKnown RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 UCKL1Q9NWZ5 548 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SLC13A4Q9UKG4 626 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 A0A0G2JPF8 293 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 TUBAL3A6NHL2 446 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 HNRNPCL2B2RXH8 293 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 HNRNPCL3B7ZW38 293 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SYT5O00445 386 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 EIF4EP06730 217 aaKnown RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 HNRNPCL4P0DMR1 293 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 RRASP10301 218 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 SELPP16109 830 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 C4BPBP20851 252 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 ST3GAL3Q11203 375 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
SPIDR-225ENST00000524141 AANATQ16613 207 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 PRAMEF8Q5VWM4 474 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 PRAMEF7Q5VXH5 474 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 BHLHB9Q6PI77 547 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 NUDT13Q86X67 352 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 GID4Q8IVV7 300 aa9.63□□□□□ -0.87
SPIDR-225ENST00000524141 OR11H4Q8NGC9 324 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms