RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 WLSQ5T9L3 541 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 SP5Q6BEB4 398 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 RTL6Q6ICC9 239 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ZNF585AQ6P3V2 769 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 LARP4Q71RC2 724 aaKnown RBP eCLIP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 LIX1Q8N485 282 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 OR1J4Q8NGS1 313 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ZFP28Q8NHY6 868 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 EFHD2Q96C19 240 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 SDCCAG3Q96C92 435 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ZBED6CLQ96FA7 236 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 C1orf50Q9BV19 199 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 C20orf27Q9GZN8 174 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 COQ3Q9NZJ6 369 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 OR10H1Q9Y4A9 318 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 MED12Q93074 2177 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 NUP214P35658 2090 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 C2orf72A6NCS6 295 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ERLIN1O75477 346 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 TRAPPC6AO75865 159 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 GPC1P35052 558 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 HPCAL1P37235 193 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 NUP107P57740 925 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 R3HCC1LQ7Z5L2 792 aaKnown RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 WDR53Q7Z5U6 358 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 WDSUB1Q8N9V3 476 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 FNDC5Q8NAU1 212 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 SORT1Q99523 831 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 LMF2Q9BU23 707 aaKnown RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 KCNK9Q9NPC2 374 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 CHST11Q9NPF2 352 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ACSS1Q9NUB1 689 aaPredicted RBP17.47■□□□□ 0.39
FBXO28-205ENST00000523990 ATP6V1HQ9UI12 483 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 MAPRE3Q9UPY8 281 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 PCDHGB3Q9Y5G1 929 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 WIF1Q9Y5W5 379 aa17.47■□□□□ 0.39
FBXO28-205ENST00000523990 KIAA1549Q9HCM3 1950 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 PKDREJQ9NTG1 2253 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 NOTCH2Q04721 2471 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 PCNX3Q9H6A9 2034 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 HNRNPRO43390 633 aaKnown RBP17.46■□□□□ 0.39
FBXO28-205ENST00000523990 BGNP21810 368 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 GRK2P25098 689 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 MANFP55145 182 aaKnown RBP17.46■□□□□ 0.39
FBXO28-205ENST00000523990 CRYZQ08257 329 aaKnown RBP17.46■□□□□ 0.39
FBXO28-205ENST00000523990 PDCD2Q16342 344 aaPredicted RBP17.46■□□□□ 0.39
FBXO28-205ENST00000523990 CYP27C1Q4G0S4 372 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.39
FBXO28-205ENST00000523990 B3GNT6Q6ZMB0 384 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 ACAD11Q709F0 780 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 CA5BP1Q8WTZ4 195 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 RND1Q92730 232 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 TUBGCP3Q96CW5 907 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 Q9N2J8 555 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 NTMQ9P121 344 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 CBLCQ9ULV8 474 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 RNF6Q9Y252 685 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 RAP2CQ9Y3L5 183 aa17.46■□□□□ 0.39
FBXO28-205ENST00000523990 ABCA12Q86UK0 2595 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 C15orf38-AP3S2A0A0A6YYH1 394 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 SNUPNO95149 360 aaKnown RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 PRPS2P11908 318 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 CYP4B1P13584 511 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 RPL3P39023 403 aaKnown RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 SLC1A6P48664 564 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 MRPS22P82650 360 aaKnown RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 PMPCAQ10713 525 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 GAB1Q13480 694 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 MLC1Q15049 377 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 TOMM20Q15388 145 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 ZNHIT3Q15649 155 aaPredicted RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 NHSL2Q5HYW2 709 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 C1orf185Q5T7R7 199 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 IL23RQ5VWK5 629 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 FAM83FQ8NEG4 500 aaPredicted RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 OR7A2PQ8NGA2 310 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 HOXB13Q92826 284 aaPredicted RBP17.45■□□□□ 0.38
FBXO28-205ENST00000523990 MARVELD3Q96A59 401 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 GIMAP5Q96F15 307 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 TTYH2Q9BSA4 534 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 EQTNQ9NQ60 294 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 SERHLQ9NQF3 203 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 HAO1Q9UJM8 370 aa17.45■□□□□ 0.38
FBXO28-205ENST00000523990 C19orf84I3L1E1 186 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 GLI4P10075 376 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 GABRA1P14867 456 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 DDX5P17844 614 aaKnown RBP17.44■□□□□ 0.38
FBXO28-205ENST00000523990 EFNA1P20827 205 aaPredicted RBP17.44■□□□□ 0.38
FBXO28-205ENST00000523990 CHRNB4P30926 498 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 EVI2BP34910 448 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 MAP3K8P41279 467 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 GAS1P54826 345 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 EIPR1Q53HC9 387 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 ULK2Q8IYT8 1036 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 ASB5Q8WWX0 329 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 MS4A4EQ96PG1 132 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 PRDM14Q9GZV8 571 aa17.44■□□□□ 0.38
FBXO28-205ENST00000523990 SIRT3Q9NTG7 399 aaPredicted RBP17.44■□□□□ 0.38
FBXO28-205ENST00000523990 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms