RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 OSBPL11Q9BXB4 747 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 RTN4RQ9BZR6 473 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 CXorf36Q9H7Y0 433 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 OR10H1Q9Y4A9 318 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
CLK4-211ENST00000522556 A0A1W2PRB8 838 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 OR6C70A6NIJ9 312 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 LBPP18428 481 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 PRPS1L1P21108 318 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 GDF1P27539 372 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MAP3K8P41279 467 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 RFX3P48380 749 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MASP1P48740 699 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 NME5P56597 212 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 PHC1P78364 1004 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 SPTBN1Q01082 2364 aaKnown RBP16.32■□□□□ 0.2
CLK4-211ENST00000522556 PGS1Q32NB8 556 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 SLC9B1Q4ZJI4 515 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 OR4F3Q6IEY1 312 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 RGS9BPQ6ZS82 235 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 ZAR1Q86SH2 424 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 CLEC4FQ8N1N0 589 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 OR5M9Q8NGP3 310 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 RNF138Q8WVD3 245 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 ITLN2Q8WWU7 325 aaPredicted RBP16.32■□□□□ 0.2
CLK4-211ENST00000522556 HOXB13Q92826 284 aaPredicted RBP16.32■□□□□ 0.2
CLK4-211ENST00000522556 TMEM41AQ96HV5 264 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MARK4Q96L34 752 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 UBQLN3Q9H347 655 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 SLCO1B3Q9NPD5 702 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 PNPLA3Q9NST1 481 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
CLK4-211ENST00000522556 KLRF1Q9NZS2 232 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 NTMQ9P121 344 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MAPRE3Q9UPY8 281 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 MEMO1Q9Y316 297 aa16.32■□□□□ 0.2
CLK4-211ENST00000522556 PCNX1Q96RV3 2341 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 PCNX3Q9H6A9 2034 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 KIAA1549Q9HCM3 1950 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 ZNF195O14628 629 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SNPHO15079 494 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 HDAC3O15379 428 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SNUPNO95149 360 aaKnown RBP16.31■□□□□ 0.2
CLK4-211ENST00000522556 PTPN6P29350 595 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 IL12BP29460 328 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 GABRA3P34903 492 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 C21orf58P58505 322 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SLC10A1Q14973 349 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 DUSP5Q16690 384 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SMU1Q2TAY7 513 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 TBCELQ5QJ74 424 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 EXOSC6Q5RKV6 272 aaKnown RBP16.31■□□□□ 0.2
CLK4-211ENST00000522556 ATG16L1Q676U5 607 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 MFSD12Q6NUT3 480 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 ARHGAP11AQ6P4F7 1023 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 HOMEZQ8IX15 550 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 WDSUB1Q8N9V3 476 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SLC16A11Q8NCK7 471 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 OR5AK3PQ8NH89 298 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 RAB3IL1Q8TBN0 382 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 RMND5BQ96G75 393 aaPredicted RBP16.31■□□□□ 0.2
CLK4-211ENST00000522556 MS4A4EQ96PG1 132 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 DUSP26Q9BV47 211 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 VIPAS39Q9H9C1 493 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SERHLQ9NQF3 203 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 ZCCHC3Q9NUD5 404 aaKnown RBP16.31■□□□□ 0.2
CLK4-211ENST00000522556 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 PLEKHB1Q9UF11 243 aaPredicted RBP16.31■□□□□ 0.2
CLK4-211ENST00000522556 CBLCQ9ULV8 474 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 SNX8Q9Y5X2 465 aa16.31■□□□□ 0.2
CLK4-211ENST00000522556 TRGV5A0A0B4J1U4 118 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 A0A1B0GVC2 190 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 EMC8O43402 210 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 SCO2O43819 266 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 C1QCP02747 245 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 IFI6P09912 130 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 IL12AP29459 219 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 GAS1P54826 345 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 HBA1P69905 142 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 MAD2L1Q13257 205 aaPredicted RBP16.3■□□□□ 0.2
CLK4-211ENST00000522556 MLC1Q15049 377 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.3■□□□□ 0.2
CLK4-211ENST00000522556 EIPR1Q53HC9 387 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 TMEM198Q66K66 360 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 TIGD3Q6B0B8 471 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 OR5M10Q6IEU7 315 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 OGFOD2Q6N063 350 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 TMEM81Q6P7N7 255 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 CAMKMTQ7Z624 323 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 ANKRD46Q86W74 232 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 SLC9A6Q92581 669 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 OR52B2Q96RD2 323 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 DMRTA2Q96SC8 542 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 LDAHQ9H6V9 325 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 RYDENQ9NUL5 291 aaKnown RBP16.3■□□□□ 0.2
CLK4-211ENST00000522556 AIG1Q9NVV5 245 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms