RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MBD3L5A6NJ08 208 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 UPK1AO00322 258 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 SYT5O00445 386 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 SCO2O43819 266 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 CYP4B1P13584 511 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 GRK2P25098 689 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 KIR2DL3P43628 341 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 KIAA0040Q15053 153 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 ANKRD26P1Q6NSI1 321 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 IFNEQ86WN2 208 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 C9orf106Q8NAJ2 232 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 MBD3L2Q8NHZ7 208 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 DOCK7Q96N67 2140 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 AMDHD1Q96NU7 426 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 SH3GL2Q99962 352 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 TUBA1CQ9BQE3 449 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 ANKZF1Q9H8Y5 726 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 DDX18Q9NVP1 670 aaKnown RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 TAS2R7Q9NYW3 318 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 FLRT3Q9NZU0 649 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 ZNF629Q9UEG4 869 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 MID2Q9UJV3 735 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 DKKL1Q9UK85 242 aa18.81■□□□□ 0.6
SDCBP-209ENST00000522243 C19orf53Q9UNZ5 99 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 RPH3AQ9Y2J0 694 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 DCHS2Q6V1P9 2916 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 CSMD2Q7Z408 3487 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 A0A087WV62 115 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 B4DXG7 233 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 H0Y3Z8 333 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 SLC28A1O00337 649 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 AZIN1O14977 448 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 SRD5A2P31213 254 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 RFX3P48380 749 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 GAS1P54826 345 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 ENPP6Q6UWR7 440 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 Q6ZSR9 355 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 ZNF551Q7Z340 670 aaPredicted RBP18.8■□□□□ 0.6
SDCBP-209ENST00000522243 OR2T11Q8NH01 316 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 ZPLD1Q8TCW7 415 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 RNASE6Q93091 150 aaKnown RBP18.8■□□□□ 0.6
SDCBP-209ENST00000522243 ELP4Q96EB1 424 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 CALHM2Q9HA72 323 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 LRTM1Q9HBL6 345 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 C1orf109Q9NX04 203 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 CRIM1Q9NZV1 1036 aa18.8■□□□□ 0.6
SDCBP-209ENST00000522243 WBP11Q9Y2W2 641 aaKnown RBP18.8■□□□□ 0.6
SDCBP-209ENST00000522243 ADGRG4Q8IZF6 3080 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 PLOD2O00469 737 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 RGS14O43566 566 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 TRIM13O60858 407 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 CPN1P15169 458 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 CTSSP25774 331 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 DGKQP52824 942 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 GFRA1P56159 465 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 GAB1Q13480 694 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 IKBIPQ70UQ0 350 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 OR4K17Q8NGC6 315 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 RNF138Q8WVD3 245 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 LRRC46Q96FV0 321 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 SFXN2Q96NB2 322 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 IQCGQ9H095 443 aaKnown RBP18.79■□□□□ 0.6
SDCBP-209ENST00000522243 DSN1Q9H410 356 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 TUBB1Q9H4B7 451 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 PPP4R1LQ9P1A2 415 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 CBLCQ9ULV8 474 aa18.79■□□□□ 0.6
SDCBP-209ENST00000522243 EEF1E1-BLOC1S5C9J1V9 151 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 EEF1E1O43324 174 aaKnown RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 AKAP10O43572 662 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 LINC00032P0C843 101 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 TMIGD3P0DMS9 266 aaPredicted RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 PRPH2P23942 346 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 DPP4P27487 766 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 EVI2BP34910 448 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 RPL38P63173 70 aaKnown RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 PSPHP78330 225 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 MRPS22P82650 360 aaKnown RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 FOXF2Q12947 444 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 HSPB3Q12988 150 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 STX5Q13190 355 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 ZNF385BQ569K4 471 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 OR2L13Q8N349 312 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 CLHC1Q8NHS4 586 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 CIDECQ96AQ7 238 aaPredicted RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 APOPT1Q96IL0 206 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 TSSK3Q96PN8 268 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 GPATCH1Q9BRR8 931 aaKnown RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 MECRQ9BV79 373 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 DNAJB12Q9NXW2 375 aaKnown RBP18.78■□□□□ 0.6
SDCBP-209ENST00000522243 SLC17A7Q9P2U7 560 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 PCNX3Q9H6A9 2034 aa18.78■□□□□ 0.6
SDCBP-209ENST00000522243 CLCA1A8K7I4 914 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 TMEM233B4DJY2 109 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 ZIC3O60481 467 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 SPAG7O75391 227 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 CTAG2O75638 210 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 SLITRK5O94991 958 aa18.77■□□□□ 0.6
SDCBP-209ENST00000522243 PSMG1O95456 288 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms