RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 C17orf47Q8NEP4 570 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 OR8K3Q8NH51 312 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 SLC38A5Q8WUX1 472 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 XAGE5Q8WWM1 108 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 RAB8BQ92930 207 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 NKD1Q969G9 470 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 MAL2Q969L2 176 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 FAM162AQ96A26 154 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 SLC35A4Q96G79 324 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 TRNT1Q96Q11 434 aaKnown RBP12.12□□□□□ -0.47
CPNE3-205ENST00000522240 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 NUDT9Q9BW91 350 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 BTBD2Q9BX70 525 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 ITPAQ9BY32 194 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 BCL2L10Q9HD36 194 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 Q9N2J8 555 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 POLE3Q9NRF9 147 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 DSPPQ9NZW4 1301 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 IGHV3-20A0A0C4DH32 117 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 TCRBV3S1A0A5B6 114 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 FRG2CA6NGY1 282 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 SLC28A2O43868 658 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 SEC24DO94855 1032 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 NR2F1P10589 423 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 NCK1P16333 377 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 KDELR2P33947 212 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 PPICP45877 212 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 POU6F2P78424 691 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 HPCAP84074 193 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 RHDQ02161 417 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 MAPK11Q15759 364 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 CRB2Q5IJ48 1285 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 DCST2Q5T1A1 773 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 IRAK1BP1Q5VVH5 260 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 CYP2R1Q6VVX0 501 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 NPSR1Q6W5P4 371 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 PPP1R32Q7Z5V6 425 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 SPATA24Q86W54 205 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 RAB43Q86YS6 212 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF321PQ8N8H1 164 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 CDS1Q92903 461 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 C8orf44Q96CB5 159 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 OTUB1Q96FW1 271 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 DUS3LQ96G46 650 aaKnown RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 IP6K3Q96PC2 410 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 EFHD1Q9BUP0 239 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 WWTR1Q9GZV5 400 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF350Q9GZX5 532 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
CPNE3-205ENST00000522240 DTX4Q9Y2E6 619 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
CPNE3-205ENST00000522240 A0A0G2JPF8 293 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 PRAMEF27A3QJZ7 478 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 A8MVJ9 347 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 C1QTNF9BB2RNN3 333 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 HNRNPCL2B2RXH8 293 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 HNRNPCL3B7ZW38 293 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 FKBP6O75344 327 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 PGM3O95394 542 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 IFNA14P01570 189 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 GPIP06744 558 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 CHRM4P08173 479 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 C1QTNF9P0C862 333 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 HNRNPCL4P0DMR1 293 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 UMPSP11172 480 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ETS2P15036 469 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 F8A1P23610 371 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 FOXC1Q12948 553 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 SYPL1Q16563 259 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 FAM69BQ5VUD6 431 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 AP1ARQ63HQ0 302 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 PLAG1Q6DJT9 500 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ZFP1Q6P2D0 407 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 HSDL2Q6YN16 418 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 WDR53Q7Z5U6 358 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-205ENST00000522240 SPPL2CQ8IUH8 684 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF441Q8N8Z8 693 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 ANKFN1Q8N957 763 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 OR11G2Q8NGC1 345 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 NUBPLQ8TB37 319 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 M1APQ8TC57 530 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 GPR151Q8TDV0 419 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 PMM1Q92871 262 aa12.1□□□□□ -0.47
CPNE3-205ENST00000522240 STMN2Q93045 179 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms