RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 POLR3HQ9Y535 204 aaPredicted RBP16.79■□□□□ 0.28
TOP1MT-216ENST00000522121 EEF1E1-BLOC1S5C9J1V9 151 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 EEF1E1O43324 174 aaKnown RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 SEC22BO75396 215 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 IL18BPO95998 194 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 CD1EP15812 388 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 GRK2P25098 689 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 MC3RP41968 323 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 DGKQP52824 942 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 ZNHIT3Q15649 155 aaPredicted RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 FLYWCH1Q4VC44 716 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 OR5M10Q6IEU7 315 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 NOXRED1Q6NXP6 359 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 POMZP3Q6PJE2 187 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 FAM222BQ8WU58 562 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 METTL2AQ96IZ6 378 aaKnown RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 TUBA1CQ9BQE3 449 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 DDX18Q9NVP1 670 aaKnown RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 FBXL2Q9UKC9 423 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 C19orf53Q9UNZ5 99 aaPredicted RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 MRPS18CQ9Y3D5 142 aaKnown RBP16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 CCDC168Q8NDH2 2452 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 EXPH5Q8NEV8 1989 aa16.78■□□□□ 0.28
TOP1MT-216ENST00000522121 SLC28A1O00337 649 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 PLOD2O00469 737 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 TMIGD3P0DMS9 266 aaPredicted RBP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 KRT4P19013 534 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 DNAJA1P31689 397 aaKnown RBP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 AGFG1P52594 562 aaKnown RBP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 GFRA1P56159 465 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 PSG6Q00889 435 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 CYP27C1Q4G0S4 372 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 SH2D4BQ5SQS7 431 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 LIPMQ5VYY2 423 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 TMEM107Q6UX40 140 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 C9orf106Q8NAJ2 232 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 OR4K17Q8NGC6 315 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 OR4N2Q8NGD1 307 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 SFXN2Q96NB2 322 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 CLEC4MQ9H2X3 399 aaPredicted RBP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 ACBD3Q9H3P7 528 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 Q9N2J8 555 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 SDHAF3Q9NRP4 125 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 PPP4R1LQ9P1A2 415 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 MRTO4Q9UKD2 239 aaKnown RBP16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 EDARQ9UNE0 448 aa16.77■□□□□ 0.28
TOP1MT-216ENST00000522121 ARHGAP21Q5T5U3 1957 aa16.77■□□□□ 0.27
TOP1MT-216ENST00000522121 ANKRD17O75179 2603 aaKnown RBP16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 TUBAL3A6NHL2 446 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 RGS14O43566 566 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 CHMP24386 653 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 DPP4P27487 766 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 ART1P52961 327 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 DECR1Q16698 335 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 PRSS53Q2L4Q9 553 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 HOMEZQ8IX15 550 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 OR2L13Q8N349 312 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 EPS8L3Q8TE67 593 aaKnown RBP16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 RNF138Q8WVD3 245 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 WNT2BQ93097 391 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 AMDHD1Q96NU7 426 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 UCN2Q96RP3 112 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 GPATCH1Q9BRR8 931 aaKnown RBP16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 SFXN3Q9BWM7 321 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 GLIPR2Q9H4G4 154 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 RASSF1Q9NS23 344 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 CBLCQ9ULV8 474 aa16.76■□□□□ 0.27
TOP1MT-216ENST00000522121 A6NNC1 897 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 CLCA1A8K7I4 914 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 UPK1AO00322 258 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 SCO2O43819 266 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 RCBTB2O95199 551 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 CHEK2O96017 543 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 TACR1P25103 407 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 EVI2BP34910 448 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 STARP49675 285 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 CLK3P49761 638 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 LHX2P50458 406 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 GAS1P54826 345 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 PSMD4P55036 377 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 DSCR4P56555 118 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 EEF1A1P68104 462 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 EEF1A1P5Q5VTE0 462 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 CLEC6AQ6EIG7 209 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 CHMP1BQ7LBR1 199 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 ADGRE4PQ86SQ3 457 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 C4orf33Q8N1A6 199 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 GOT1L1Q8NHS2 421 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 NRGNQ92686 78 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 ELP4Q96EB1 424 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 RMND5BQ96G75 393 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 TRMOQ9BU70 441 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 IQCGQ9H095 443 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 C12orf65Q9H3J6 166 aaKnown RBP16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 C3orf14Q9HBI5 128 aa16.75■□□□□ 0.27
TOP1MT-216ENST00000522121 LRTM1Q9HBL6 345 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms