RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ICOSLGO75144 302 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 GDF1P27539 372 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 MAN2A2P49641 1150 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 PNLIPRP2P54317 469 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 PRKAG1P54619 331 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 CLDN8P56748 225 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 C21orf58P58505 322 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 OCRLQ01968 901 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 EFR3AQ14156 821 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 ZNHIT3Q15649 155 aaPredicted RBP18.88■□□□□ 0.61
TRIM35-203ENST00000521253 CYP27C1Q4G0S4 372 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 EMC4Q5J8M3 183 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 NCCRP1Q6ZVX7 275 aaPredicted RBP18.88■□□□□ 0.61
TRIM35-203ENST00000521253 SZRD1Q7Z422 152 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 NUP43Q8NFH3 380 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 ITLN2Q8WWU7 325 aaPredicted RBP18.88■□□□□ 0.61
TRIM35-203ENST00000521253 GIMAP5Q96F15 307 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 PRPF18Q99633 342 aaKnown RBP18.88■□□□□ 0.61
TRIM35-203ENST00000521253 SH3GL2Q99962 352 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 Q9N2J8 555 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 ACKR4Q9NPB9 350 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 SIRT3Q9NTG7 399 aaPredicted RBP18.88■□□□□ 0.61
TRIM35-203ENST00000521253 CBLCQ9ULV8 474 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 EXPH5Q8NEV8 1989 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 GTF3C1Q12789 2109 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 OR14I1A6ND48 311 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 SDHDO14521 159 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 HCN1O60741 890 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 ENDOUP21128 410 aaKnown RBP18.87■□□□□ 0.61
TRIM35-203ENST00000521253 ADORA2A-AS1P86434 159 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 TIGD3Q6B0B8 471 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 ANGPTL8Q6UXH0 198 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 MAMDC2Q7Z304 686 aaPredicted RBP18.87■□□□□ 0.61
TRIM35-203ENST00000521253 LRRC34Q8IZ02 419 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 NATD1Q8N6N6 113 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 CEP70Q8NHQ1 597 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 RNF138Q8WVD3 245 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 HOXB13Q92826 284 aaPredicted RBP18.87■□□□□ 0.61
TRIM35-203ENST00000521253 FAM120BQ96EK7 910 aaKnown RBP18.87■□□□□ 0.61
TRIM35-203ENST00000521253 MS4A4EQ96PG1 132 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 BHLHE41Q9C0J9 482 aaPredicted RBP18.87■□□□□ 0.61
TRIM35-203ENST00000521253 SLC6A15Q9H2J7 730 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 EXO5Q9H790 373 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 C3orf14Q9HBI5 128 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 SPRR3Q9UBC9 169 aa18.87■□□□□ 0.61
TRIM35-203ENST00000521253 DNAJC13O75165 2243 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 E9PLN8 166 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 SNPHO15079 494 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 HDAC3O15379 428 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 EMC8O43402 210 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 TRAPPC6AO75865 159 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 KITP10721 976 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 CYP4B1P13584 511 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 LBPP18428 481 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 ELAVL4P26378 380 aaKnown RBP18.86■□□□□ 0.61
TRIM35-203ENST00000521253 PTPN6P29350 595 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 GABRA3P34903 492 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 MAP3K8P41279 467 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 TRPC1P48995 793 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 DECR1Q16698 335 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 GXYLT1Q4G148 440 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 HIST2H2BCQ6DN03 193 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 RPTNQ6XPR3 784 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 CAMKMTQ7Z624 323 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 MRGPRGQ86SM5 289 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 WDR75Q8IWA0 830 aaKnown RBP18.86■□□□□ 0.61
TRIM35-203ENST00000521253 CDRT4Q8N9R6 151 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 OR5M9Q8NGP3 310 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 OR1J4Q8NGS1 313 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 NEIL3Q8TAT5 605 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 FBXO30Q8TB52 745 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 OR5P2Q8WZ92 322 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 DMRTA2Q96SC8 542 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 VKORC1Q9BQB6 163 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 DUSP26Q9BV47 211 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 TP63Q9H3D4 680 aaPredicted RBP18.86■□□□□ 0.61
TRIM35-203ENST00000521253 VIPAS39Q9H9C1 493 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 PNPLA3Q9NST1 481 aa18.86■□□□□ 0.61
TRIM35-203ENST00000521253 GXYLT2A0PJZ3 443 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 TTC36A6NLP5 189 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 BCKDKO14874 412 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 KLF11O14901 512 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 C6orf47O95873 294 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 HPNP05981 417 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 MRPS22P82650 360 aaKnown RBP18.85■□□□□ 0.61
TRIM35-203ENST00000521253 PRR5P85299 388 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 PGS1Q32NB8 556 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 OGFOD2Q6N063 350 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 MFSD12Q6NUT3 480 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 EID3Q8N140 333 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 ZNF808Q8N4W9 903 aaPredicted RBP18.85■□□□□ 0.61
TRIM35-203ENST00000521253 WDSUB1Q8N9V3 476 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 PSMA8Q8TAA3 256 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 GPR151Q8TDV0 419 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 PIK3R3Q92569 461 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 ZNF75CPQ92670 426 aaPredicted RBP18.85■□□□□ 0.61
TRIM35-203ENST00000521253 SARAFQ96BY9 339 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 C16orf58Q96GQ5 468 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 WDR55Q9H6Y2 383 aaPredicted RBP18.85■□□□□ 0.61
TRIM35-203ENST00000521253 CXorf36Q9H7Y0 433 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms