RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 TIFABQ6ZNK6 161 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 GPRIN3Q6ZVF9 776 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 EFHD2Q96C19 240 aaPredicted RBP18.36■□□□□ 0.53
PABPC1-217ENST00000521067 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 SFXN2Q96NB2 322 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 KCNA7Q96RP8 456 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 SMR3AQ99954 134 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 TSPYL1Q9H0U9 437 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 SLC35C2Q9NQQ7 365 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 MRPS18CQ9Y3D5 142 aaKnown RBP18.36■□□□□ 0.53
PABPC1-217ENST00000521067 TIMM22Q9Y584 194 aa18.36■□□□□ 0.53
PABPC1-217ENST00000521067 A0A087WUV0 522 aaPredicted RBP18.35■□□□□ 0.53
PABPC1-217ENST00000521067 A0A1W2PNV4 684 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 SH3D21A4FU49 640 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 HCRTR2O43614 444 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 PLOD3O60568 738 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 ABCB7O75027 752 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 IMPDH1P20839 514 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 DPP4P27487 766 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 WHAMMP3Q1A5X7 153 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 AAGABQ6PD74 315 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 SLC44A2Q8IWA5 706 aaPredicted RBP18.35■□□□□ 0.53
PABPC1-217ENST00000521067 EBPLQ9BY08 206 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 RTN4RQ9BZR6 473 aa18.35■□□□□ 0.53
PABPC1-217ENST00000521067 GNG14A0A1W2PPG7 69 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 H0YC42 278 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 CHMP24386 653 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 CPA2P48052 419 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 PNLIPRP2P54317 469 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 TPD52P55327 224 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-217ENST00000521067 PSG6Q00889 435 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 BTKQ06187 659 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 FAM27E3Q08E93 113 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 GAB1Q13480 694 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 EFR3AQ14156 821 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 GALNT18Q6P9A2 607 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 GRAMD2AQ8IUY3 354 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 GBP7Q8N8V2 638 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-217ENST00000521067 STARD4Q96DR4 205 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 MTBPQ96DY7 904 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 PIGMQ9H3S5 423 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 FLRT3Q9NZU0 649 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 DKKL1Q9UK85 242 aa18.34■□□□□ 0.53
PABPC1-217ENST00000521067 ABCA2Q9BZC7 2435 aa18.33■□□□□ 0.53
PABPC1-217ENST00000521067 SIAH2O43255 324 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 GOSR1O95249 250 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 TAC1P20366 129 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 ATP5F1P24539 256 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-217ENST00000521067 IL12BP29460 328 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 HMOX2P30519 316 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 TIA1P31483 386 aaKnown RBP eCLIP18.33■□□□□ 0.521e-323■■■■□ 25.1
PABPC1-217ENST00000521067 PRKAA2P54646 552 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 FOXA1P55317 472 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 ACSM2AQ08AH3 577 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 HEPACAMQ14CZ8 416 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 BCL2A1Q16548 175 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 ERCC6LQ2NKX8 1250 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 SPIN4Q56A73 249 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 ACSM2BQ68CK6 577 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 VWA1Q6PCB0 445 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 CXorf67Q86X51 503 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-217ENST00000521067 FADS6Q8N9I5 356 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-217ENST00000521067 DSN1Q9H410 356 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 PACSIN3Q9UKS6 424 aa18.33■□□□□ 0.52
PABPC1-217ENST00000521067 EXOC1LA0A1B0GW35 172 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 MYO1GB0I1T2 1018 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 UBFD1O14562 309 aaKnown RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 FADS1O60427 444 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 MPIP34949 423 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 KRT20P35900 424 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 SUCLG1P53597 346 aaKnown RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 DSCR4P56555 118 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 ZNF474Q6S9Z5 364 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 BTLAQ7Z6A9 289 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 SAMD14Q8IZD0 417 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 OR2M3Q8NG83 312 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 SMPDL3BQ92485 455 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 FIG4Q92562 907 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 WFIKKN1Q96NZ8 548 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 ACBD3Q9H3P7 528 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 GSTO2Q9H4Y5 243 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 TAS2R9Q9NYW1 312 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 MED11Q9P086 117 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 TESMINQ9Y4I5 508 aa18.32■□□□□ 0.52
PABPC1-217ENST00000521067 NSD1Q96L73 2696 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-217ENST00000521067 SERTM1A2A2V5 107 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 GOLGA8RI6L899 631 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 SCO2O43819 266 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 JUNP05412 331 aaKnown RBP18.31■□□□□ 0.52
PABPC1-217ENST00000521067 ANXA4P09525 319 aaPredicted RBP18.31■□□□□ 0.52
PABPC1-217ENST00000521067 EVI2BP34910 448 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 KIR2DL2P43627 348 aaPredicted RBP18.31■□□□□ 0.52
PABPC1-217ENST00000521067 DIO3P55073 304 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 Q71RC1 249 aaPredicted RBP18.31■□□□□ 0.52
PABPC1-217ENST00000521067 UBQLNLQ8IYU4 475 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 FAM9CQ8IZT9 166 aa18.31■□□□□ 0.52
PABPC1-217ENST00000521067 OR4K17Q8NGC6 315 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms