RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 FZD8Q9H461 694 aa8.29□□□□□ -1.08
CSMD1-206ENST00000520002 POP7O75817 140 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 FABP1P07148 127 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 BMP2P12643 396 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 HLA-EP13747 358 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TYRP1P17643 537 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SORDQ00796 357 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 IDO2Q6ZQW0 420 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CREB3L2Q70SY1 520 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 MYLIPQ8WY64 445 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SDHAF3Q9NRP4 125 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NLGN3Q9NZ94 848 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ZFC3H1O60293 1989 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ADAMTS3O15072 1205 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PROZP22891 400 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 DPP6P42658 865 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SSX7Q7RTT5 188 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GRAMD2AQ8IUY3 354 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 RSC1A1Q92681 617 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NPAP1Q9NZP6 1156 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 KCNK6Q9Y257 313 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ATG4BQ9Y4P1 393 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 YIPF1Q9Y548 306 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 INHAP05111 366 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GNSP15586 552 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GPR85P60893 370 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GALNT2Q10471 571 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 C22orf39Q6P5X5 142 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 OR2AP1Q8NGE2 309 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ELF4Q99607 663 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PKMYT1Q99640 499 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 OR8D2Q9GZM6 311 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CNOT1A5YKK6 2376 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 MDFIC2A0A1B0GVS7 189 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 HTD2P86397 168 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SCGB2A2Q13296 93 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NPY5RQ15761 445 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PTCHD3Q3KNS1 767 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SLC6A19Q695T7 634 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NINJ1Q92982 152 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TXNDC15Q96J42 360 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 MRM3Q9HC36 420 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GPR52Q9Y2T5 361 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 DDX60Q8IY21 1712 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 LAMB4A4D0S4 1761 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NFAT5O94916 1531 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 A0A0D9SEW6 157 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF860A6NHJ4 632 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 EMX2Q04743 252 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 RAB41Q5JT25 222 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 AVL9Q8NBF6 648 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CA5BP1Q8WTZ4 195 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TFAP2CQ92754 450 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 LRR1Q96L50 414 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NTMT1Q9BV86 223 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 IL21RQ9HBE5 538 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PTBP3O95758 552 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 NDUFS1P28331 727 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ST3GAL3Q11203 375 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TRAM2Q15035 370 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 MS4A13Q5J8X5 152 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SYT14Q8NB59 555 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TFGQ92734 400 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ZMAT5Q9UDW3 170 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ACTL7AQ9Y615 435 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 FAM230AA0A1W2PPH8 454 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 C11orf98E9PRG8 122 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PCSK6P29122 969 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 BCL2A1Q16548 175 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 B3GNT8Q7Z7M8 397 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GPR149Q86SP6 731 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TMEM156Q8N614 296 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 IGKV6D-41A0A0C4DH26 115 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 UNC119BA6NIH7 251 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 LGALS8O00214 317 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TYRP14679 529 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 SLC6A6P31641 620 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF776Q68DI1 518 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 OR10K2Q6IF99 312 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 UNQ6126/PRO20091Q6UXV3 157 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TECPR1Q7Z6L1 1165 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PAPD5Q8NDF8 572 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 LMF1Q96S06 567 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CMKLR1Q99788 373 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ASB4Q9Y574 426 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 ECM29Q5VYK3 1845 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 LOC102724200A0A096LPH7 203 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PRSS51A0A1B0GVH4 220 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 PMM2O15305 246 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 TNFP01375 233 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CCL14Q16627 93 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 CTU1Q7Z7A3 348 aaKnown RBP8.28□□□□□ -1.08
CSMD1-206ENST00000520002 KDM8Q8N371 416 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 GNPDA2Q8TDQ7 276 aa8.28□□□□□ -1.08
CSMD1-206ENST00000520002 MICU1Q9BPX6 476 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms