RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 FUNDC2Q9BWH2 189 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 ZNF350Q9GZX5 532 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 ACOT13Q9NPJ3 140 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 IRAK4Q9NWZ3 460 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 SLC6A14Q9UN76 642 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 SATB2Q9UPW6 733 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 SIT1Q9Y3P8 196 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 ABCA7Q8IZY2 2146 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 HYKKA2RU49 373 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 CLCA1A8K7I4 914 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 BCAT2O15382 392 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-210ENST00000517713 SOX14O95416 240 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 CCNYL3P0C7X3 344 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 ALDH4A1P30038 563 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 AFF3P51826 1226 aaKnown RBP24.75■■□□□ 1.55
COL13A1-210ENST00000517713 EPHA4P54764 986 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 FAM53BQ14153 422 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 LARS2Q15031 903 aaKnown RBP24.75■■□□□ 1.55
COL13A1-210ENST00000517713 DCST2Q5T1A1 773 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 NKAIN2Q5VXU1 208 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 DGAT2L6Q6ZPD8 337 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 ZER1Q7Z7L7 766 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 PIK3R3Q92569 461 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 GGHQ92820 318 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 MYDGFQ969H8 173 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 PEX11GQ96HA9 241 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 RAB33BQ9H082 229 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 PDE7BQ9NP56 450 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 AMBNQ9NP70 447 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 RNF215Q9Y6U7 377 aa24.75■■□□□ 1.55
COL13A1-210ENST00000517713 CPSF4LA6NMK7 179 aaKnown RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 H3BN98 237 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 MAN1A2O60476 641 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 STX11O75558 287 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 CYP7B1O75881 506 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 NSA2O95478 260 aaKnown RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 ZBTB11O95625 1053 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 IGFBP1P08833 259 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 MMP11P24347 488 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 RGS8P57771 180 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 COX10Q12887 443 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 SLC13A2Q13183 592 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 DUSP8Q13202 625 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 GPR68Q15743 365 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 CD300LDQ6UXZ3 194 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 PTCHD4Q6ZW05 846 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 COX18Q8N8Q8 333 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 GPR151Q8TDV0 419 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 SLC38A4Q969I6 547 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 FKBP10Q96AY3 582 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 ZDHHC12Q96GR4 267 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 DUSP15Q9H1R2 295 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 FKBP14Q9NWM8 211 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 LRIT1Q9P2V4 623 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 EPHA6Q9UF33 1036 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 CCNA2P20248 432 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 NUDT6P53370 316 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 DMWDQ09019 674 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 WDR45BQ5MNZ6 344 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 GARNL3Q5VVW2 1013 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 C1orf94Q6P1W5 598 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 ZNF836Q6ZNA1 936 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 VWA5B2Q8N398 1253 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 DIO2Q92813 273 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 C11orf16Q9NQ32 467 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 SEMA4GQ9NTN9 838 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 MRPS33Q9Y291 106 aaKnown RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 HEMK1Q9Y5R4 338 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-210ENST00000517713 EML5Q05BV3 1969 aa24.74■■□□□ 1.55
COL13A1-210ENST00000517713 A0A1W2PPW3 197 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 AGAP5A6NIR3 686 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 AP3D1O14617 1153 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ACVR2AP27037 513 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 IFNA8P32881 189 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 TRHRP34981 398 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-210ENST00000517713 MAP3K8P41279 467 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ALDH6A1Q02252 535 aaKnown RBP24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ST3GAL3Q11203 375 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 MAP4K2Q12851 820 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 TRAM2Q15035 370 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 SYT6Q5T7P8 510 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-210ENST00000517713 SLX4IPQ5VYV7 408 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ZNF619Q8N2I2 560 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 OR6C4Q8NGE1 309 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 CHRNA10Q9GZZ6 450 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 GPN2Q9H9Y4 310 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-210ENST00000517713 TIMMDC1Q9NPL8 285 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 BLACEA4D250 179 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 TMX2-CTNND1H3BSU7 103 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 CBX7O95931 251 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 THBS1P07996 1170 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 MAT1AQ00266 395 aaKnown RBP24.73■■□□□ 1.55
COL13A1-210ENST00000517713 HOXC5Q00444 222 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 TCTE1Q5JU00 501 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ZNF595Q8IYB9 648 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 UBALD2Q8IYN6 164 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 OR52R1Q8NGF1 315 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 ADAMTS18Q8TE60 1221 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 SAP130Q9H0E3 1048 aa24.73■■□□□ 1.55
COL13A1-210ENST00000517713 KLHL3Q9UH77 587 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms