RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 KLK4Q9Y5K2 254 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 HIDE1A8MVS5 230 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 PLD2O14939 933 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ITGA10O75578 1167 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ARL6IP5O75915 188 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR2B3O76000 313 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 CLDN2P57739 230 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC36A4Q6YBV0 504 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 LAX1Q8IWV1 398 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 LRRC25Q8N386 305 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZFP41Q8N8Y5 198 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 CIDECQ96AQ7 238 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ERMAPQ96PL5 475 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 UCKL1Q9NWZ5 548 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 GP1BBP13224 206 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPX2P18283 190 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 AOAHP28039 575 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 NAA10P41227 235 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 RACK1P63244 317 aaKnown RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 HSF2Q03933 536 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 DSG2Q14126 1118 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 HNRNPA1L2Q32P51 320 aaKnown RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 HTR3DQ70Z44 454 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 IQCF1Q8N6M8 205 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 BBS10Q8TAM1 723 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ALOXE3Q9BYJ1 711 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF224Q9NZL3 707 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 NPAP1Q9NZP6 1156 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 GRHPRQ9UBQ7 328 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 STOML2Q9UJZ1 356 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 BRCA2P51587 3418 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZSCAN5BA6NJL1 495 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF879B4DU55 563 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PDCD5O14737 125 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SCO2O43819 266 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ERP29P30040 261 aaKnown RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC6A6P31641 620 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPR4P46093 362 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 AP2S1P53680 142 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 DSC1Q08554 894 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC14A1Q13336 389 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PARS2Q7L3T8 475 aaKnown RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPAT4Q86UL3 456 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF101Q8IZC7 436 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ARMC10Q8N2F6 343 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 TOMM5Q8N4H5 51 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF717Q9BY31 904 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 TTYH1Q9H313 450 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CNOT2Q9NZN8 540 aaKnown RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 NLKQ9UBE8 527 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 LIPT1Q9Y234 373 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 INMT-MINDY4F8WBC2 141 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 TRAPPC6AO75865 159 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 LDOC1O95751 146 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PYCR1P32322 319 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CBX5P45973 191 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZFP36L2P47974 494 aaKnown RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SHC2P98077 582 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PIN1Q13526 163 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SMCO1Q147U7 214 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 RPS26P11Q5JNZ5 115 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CDKL4Q5MAI5 379 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 MEDAGQ5VYS4 303 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 XKRXQ6PP77 449 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CALHM3Q86XJ0 350 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 AVL9Q8NBF6 648 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR6N1Q8NGY5 312 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GATAD2BQ8WXI9 593 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 RLIMQ9NVW2 624 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 KLF15Q9UIH9 416 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 LOC100509620A0A075B734 347 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR3A3P47888 321 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR3A2P47893 321 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC6A11P48066 632 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GDPGP1Q6ZNW5 385 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR4K5Q8NGD3 323 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC35B4Q969S0 331 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ECHDC3Q96DC8 303 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PEX11GQ96HA9 241 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 HSPA12BQ96MM6 686 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PDE7BQ9NP56 450 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 CA14Q9ULX7 337 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 PCDHGB2Q9Y5G2 931 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 NPIPA5E9PKD4 350 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 FAAHO00519 579 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 ADAP00813 363 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OSMP13725 252 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 TAS2R38P59533 333 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 MPP7Q5T2T1 576 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms