RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 PIGTQ969N2 578 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 DACT3Q96B18 629 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 C18orf25Q96B23 403 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 UPRTQ96BW1 309 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 PCED1BQ96HM7 432 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF578Q96N58 590 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBM4BQ9BQ04 359 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 PELOQ9BRX2 385 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR52A5Q9H2C5 316 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CXXC4Q9H2H0 198 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RANBP3Q9H6Z4 567 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 VIPAS39Q9H9C1 493 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC38A7Q9NVC3 462 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM45AQ9NWC5 275 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPR83Q9NYM4 423 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 NKIRAS1Q9NYS0 192 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FLRT3Q9NZU0 649 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 PPP4R1LQ9P1A2 415 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 GHRLQ9UBU3 117 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 PACSIN3Q9UKS6 424 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 STUB1Q9UNE7 303 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TIMM10BQ9Y5J6 103 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 DMRT1Q9Y5R6 373 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 R4GN57 208 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 MROH7-TTC4A0A0A0MT08 1334 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TRBV5-3A0A0A0MS03 114 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM120BA0PK00 339 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRP5LA4QPB2 252 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SRRM4A7MD48 611 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 E7ENQ6 273 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OVOL3O00110 214 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPAA1O43292 621 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZBTB11O95625 1053 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 IGF1P05019 195 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MBL2P11226 248 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ANXA3P12429 323 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TCN1P20061 433 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MMP11P24347 488 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 HMGB2P26583 209 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CD1CP29017 333 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 IL12BP29460 328 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CD40LGP29965 261 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 NAA10P41227 235 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CRYBB2P43320 205 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 P2RY1P47900 373 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OC90Q02509 493 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 KLF5Q13887 457 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 GRB14Q14449 540 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MEF2DQ14814 521 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF284Q2VY69 593 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TCHHL1Q5QJ38 904 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CELF3Q5SZQ8 465 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OTUD3Q5T2D3 398 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CLEC6AQ6EIG7 209 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR4C11Q6IEV9 310 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 BHLHB9Q6PI77 547 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 UNQ6126/PRO20091Q6UXV3 157 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF562Q6V9R5 426 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 LANCL3Q6ZV70 420 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TTLL10Q6ZVT0 673 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 FRA10AC1Q70Z53 315 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 NET1Q7Z628 596 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CATSPERDQ86XM0 798 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 PLCZ1Q86YW0 608 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 LINC00518Q8N0U6 118 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR10H4Q8NGA5 316 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR4D6Q8NGJ1 314 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR9G4Q8NGQ1 327 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR6S1Q8NH40 331 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CACNG8Q8WXS5 425 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SMPDL3AQ92484 453 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SMG7Q92540 1137 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 PIK3R3Q92569 461 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 TIMD4Q96H15 378 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 C12orf42Q96LP6 360 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 C10orf90Q96M02 699 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 BBC3Q96PG8 261 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 NEDD4LQ96PU5 975 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 IL4I1Q96RQ9 567 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CSF3RQ99062 836 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SH2D3AQ9BRG2 576 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CCM2Q9BSQ5 444 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CNPY3Q9BT09 278 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 RAB1BQ9H0U4 201 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADNPQ9H2P0 1102 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 VCX3BQ9H321 246 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 GOLPH3Q9H4A6 298 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ALG9Q9H6U8 611 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 MAP6D1Q9H9H5 199 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 CHST11Q9NPF2 352 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC17A5Q9NRA2 495 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 OLFML3Q9NRN5 406 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZDHHC18Q9NUE0 388 aa3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 LYARQ9NX58 379 aaKnown RBP3.55□□□□□ -1.84
RNU4-60P-201ENST00000517239 SYBUQ9NX95 663 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms